Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene24001 SustainPine v3.0 545
AutoFact: protein IMPACT-A [Xenopus (Silurana) tropicalis] sp|Q5M8G6.1|IMPTA_XENTR RecName: Full=Protein IMPACT-A; AltName: Full=Imprinted and ancient gene protein homolog A gb|AAH88032.1| imprinted and ancient [Xenopus (Silurana) tropicalis] emb|CAJ83093.1| Novel 1.0e-10
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene24014 SustainPine v3.0 1339
AutoFact: aromatic and neutral transporter 1 [Arabidopsis thaliana] gb|AAF23206.1|AC016795_19 putative amino acid transporter protein [Arabidopsis thaliana] gb|AAP37661.1| At3g11900 [Arabidopsis thaliana] dbj|BAE99605.1| putative amino acid transporter protein [Ara 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene24295 SustainPine v3.0 2856
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene24385 SustainPine v3.0 1012
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene24564 SustainPine v3.0 1156
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene25048 SustainPine v3.0 1474
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene25091 SustainPine v3.0 1704
AutoFact: ubiquitin-protein ligase E3-alpha-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene25362 SustainPine v3.0 507
AutoFact: DUF427 domain containing protein 6.0e-31
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Complete
sp_v3.0_unigene25456 SustainPine v3.0 843
AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
N-terminus
sp_v3.0_unigene25597 SustainPine v3.0 492
AutoFact: eukaryotic translation initiation factor 2B, subunit 3 gamma [Dictyostelium discoideum AX4] sp|Q54FQ8.1|EI2BG_DICDI RecName: Full=Translation initiation factor eIF-2B subunit gamma; AltName: Full=eIF-2B GDP-GTP exchange factor subunit gamma gb|EAL62097.1| 3.0e-20
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene25809 SustainPine v3.0 870
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene26105 SustainPine v3.0 683
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene26303 SustainPine v3.0 527
AutoFact: nuclear transportin [Triticum aestivum] 2.0e-05
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
sp_v3.0_unigene26322 SustainPine v3.0 771
AutoFact: PREDICTED: transmembrane and coiled-coil domain-containing protein 7 [Monodelphis domestica] 0.0001
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative N-terminus
sp_v3.0_unigene27434 SustainPine v3.0 529
AutoFact: Ubiquinol-cytochrome c reductase complex 14 kDa protein (AFU_orthologue; AFUA_4G06790) n=2 Tax=Emericella nidulans RepID=C8V8V4_EMENI 3.00004e-41
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene27461 SustainPine v3.0 508
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene27504 SustainPine v3.0 445
AutoFact: DUF1640 domain containing protein 3.0e-17
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
C-terminus
sp_v3.0_unigene27613 SustainPine v3.0 890
AutoFact: VQ motif-containing protein [Arabidopsis thaliana] gb|AAF81352.1|AC036104_1 Contains weak similarity to alpha-/beta-gliadin class A-II from Triticum aestivum gb|M10092 [Arabidopsis thaliana] gb|AEE30087.1| VQ motif-containing protein [Arabidopsis thaliana 3.0e-05
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
sp_v3.0_unigene27617 SustainPine v3.0 1423
AutoFact: pfam12937, F-box-like, F-box-like 0.0001
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative Complete
sp_v3.0_unigene27653 SustainPine v3.0 879
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 2.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain