Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; subsp. trichocarpa).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene159762 SustainPine v3.0 465
AutoFact: coilin [Arabidopsis thaliana] gb|AAM13027.1| unknown protein [Arabidopsis thaliana] gb|AAM91333.1| unknown protein [Arabidopsis thaliana] gb|AEE28961.1| coilin [Arabidopsis thaliana] 8.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene159778 SustainPine v3.0 345
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene160051 SustainPine v3.0 522
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene160058 SustainPine v3.0 499
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK50098.1|AF372960_1 AT3g15470/MJK13_13 [Arabidopsis thaliana] gb|AAF35413.1| unknown protein [Arabidopsis thaliana] dbj|BAB02376.1| WD-40 repeat protein-like [Arabidopsis thaliana] gb|A 1.0e-36
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: WD-40 repeat protein-like 3.105e-07
Internal
sp_v3.0_unigene160094 SustainPine v3.0 480
AutoFact: 2-phosphoglycerate kinase-related protein [Arabidopsis thaliana] dbj|BAB10097.1| unnamed protein product [Arabidopsis thaliana] gb|AAO22756.1| unknown protein [Arabidopsis thaliana] gb|AAO42372.1| unknown protein [Arabidopsis thaliana] gb|AED97374.1| 2-ph 4.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene160141 SustainPine v3.0 350
AutoFact: serine protein kinase-like [Arabidopsis thaliana] 4.0e-17
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: SRPK4 4.296e-09
Internal
sp_v3.0_unigene160149 SustainPine v3.0 161
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene160394 SustainPine v3.0 449
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene160452 SustainPine v3.0 428
AutoFact: Ubiquinone biosynthesis-related protein, putative n=1 Tax=Cryptococcus gattii WM276 RepID=E6R6J7_CRYGW 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene160603 SustainPine v3.0 488
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Chromosome chr10 scaffold_81, whole genome shotgun sequence 1.524e-09
Internal
sp_v3.0_unigene160617 SustainPine v3.0 312
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene160700 SustainPine v3.0 348
AutoFact: peptide chain release factor 2, putative [Arabidopsis thaliana] 1.0e-21
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Peptide chain release factor 2, putative 8.693e-10
Internal
sp_v3.0_unigene160830 SustainPine v3.0 338
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene160844 SustainPine v3.0 198
AutoFact: DUF247 domain containing protein 3.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene160878 SustainPine v3.0 375
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene160951 SustainPine v3.0 288
AutoFact: putative transporter [Arabidopsis thaliana] gb|AAG52102.1|AC012680_13 putative transporter; 34935-36578 [Arabidopsis thaliana] gb|AAO42813.1| At1g78130 [Arabidopsis thaliana] dbj|BAE99345.1| transporter like protein [Arabidopsis thaliana] gb|AEE36070.1| p 1.0e-28
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Transporter-like protein 2.01e-21
Internal
sp_v3.0_unigene161180 SustainPine v3.0 388
AutoFact: Retrotrans_gag domain containing protein 3.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene161263 SustainPine v3.0 494
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STJ6_RICCO 7.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene161362 SustainPine v3.0 372
AutoFact: kinesin (centromeric protein)-like protein [Arabidopsis thaliana] 5.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene161415 SustainPine v3.0 365
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] dbj|BAB09816.1| unnamed protein product [Arabidopsis thaliana] gb|AED91069.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] 1.0e-19
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain