Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; subsp. trichocarpa).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene157774 SustainPine v3.0 516
AutoFact: Retrotrans_gag domain containing protein 1.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene157803 SustainPine v3.0 163
AutoFact: START domain containing protein [Entamoeba histolytica HM-1:IMSS] gb|EAL47006.1| START domain containing protein [Entamoeba histolytica HM-1:IMSS] 1.0e-10
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene158012 SustainPine v3.0 383
AutoFact: Hydrolase, isochorismatase family n=2 Tax=Pseudomonas fluorescens RepID=Q4KDV0_PSEF5 5.0e-30
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene158124 SustainPine v3.0 200
AutoFact: Glutamate 5-kinase n=3 Tax=Pseudomonas RepID=PROB_PSEMY 4.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene158171 SustainPine v3.0 377
AutoFact: Substrate-binding periplasmic protein n=2 Tax=Pseudomonas fluorescens RepID=C3JYM2_PSEFS 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene158199 SustainPine v3.0 397
AutoFact: Duf1446 domain containing protein n=1 Tax=Grosmannia clavigera kw1407 RepID=F0X792_GROCL 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene158254 SustainPine v3.0 146
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene158393 SustainPine v3.0 188
AutoFact: Putative iron-sulfur cluster binding protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0AB66_ALHEH 5.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene158539 SustainPine v3.0 328
AutoFact: Chitinase class I family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q24I34_TETTH 1.0e-24
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene158570 SustainPine v3.0 222
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene159147 SustainPine v3.0 209
AutoFact: Putative salivary protein (Fragment) n=1 Tax=Culicoides sonorensis RepID=Q66UA2_9DIPT 2.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene159284 SustainPine v3.0 193
AutoFact: GTP-binding protein TypA n=3 Tax=Flavobacteriales RepID=A5FA32_FLAJ1 3.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene159444 SustainPine v3.0 289
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene159483 SustainPine v3.0 241
AutoFact: Ribosome hibernation protein YhbH n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VYM2_9BURK 7.0e-12
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene159512 SustainPine v3.0 233
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene159532 SustainPine v3.0 456
AutoFact: Retrotrans_gag domain containing protein 3.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene159592 SustainPine v3.0 315
AutoFact: TIR class disease resistance protein [Arabidopsis thaliana] gb|AEE33780.1| TIR class disease resistance protein [Arabidopsis thaliana] 1.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene159637 SustainPine v3.0 374
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene159662 SustainPine v3.0 457
AutoFact: ribonuclease H I [Leptospira interrogans serovar Lai str. 56601] gb|AAN49171.1| ribonuclease H I [Leptospira interrogans serovar Lai str. 56601] 5.0e-05
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene159699 SustainPine v3.0 509
AutoFact: GTP-binding protein alpha subunit, gna, putative n=1 Tax=Ricinus communis RepID=B9RZ26_RICCO 5.0e-10
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain