Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; subsp. trichocarpa).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene155727 SustainPine v3.0 319
AutoFact: translocon-associated protein TRAP alpha subunit [Dictyostelium discoideum AX4] sp|Q54R45.1|SSRA_DICDI RecName: Full=Translocon-associated protein subunit alpha; Short=TRAP-alpha; AltName: Full=Signal sequence receptor subunit alpha; Short=SSR-alpha; Flag 4.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene155865 SustainPine v3.0 459
AutoFact: Putative LysR family transcriptional regulator n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K9Y5_PSEPF 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene155872 SustainPine v3.0 414
AutoFact: Extracellular ligand-binding receptor n=10 Tax=Pseudomonas RepID=A5W9Q5_PSEP1 6.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene156182 SustainPine v3.0 432
AutoFact: protein fat-free [Danio rerio] sp|Q155U0.1|FFR_DANRE RecName: Full=Protein fat-free gb|ABG23689.1| fat-free protein [Danio rerio] gb|AAI62802.1| C11orf2 homolog (H. sapiens) [Danio rerio] gb|AAI62801.1| C11orf2 homolog (H. sapiens) [Danio rerio] 5.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene156387 SustainPine v3.0 241
AutoFact: GTP-binding protein TypA n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PK01_CHIPD 2.0e-34
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene156485 SustainPine v3.0 343
AutoFact: Alpha/beta hydrolase fold-3 domain-containing protein n=4 Tax=Ajellomyces capsulatus RepID=C0NK69_AJECG 3.0e-39
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene156691 SustainPine v3.0 468
AutoFact: Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Planctomyces brasiliensis DSM 5305 RepID=F0SJE0_PLABD 6.0e-36
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene156821 SustainPine v3.0 378
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene156959 SustainPine v3.0 378
AutoFact: Adenosine_kin domain containing protein 2.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene156996 SustainPine v3.0 409
AutoFact: Possible 2-dehydro-3-deoxyglucarate aldolase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKV2_9PROT 2.0e-20
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene157005 SustainPine v3.0 429
AutoFact: UPF0234 protein AZOSEA28950 n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Y2895_AROAE 1.0e-19
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene157068 SustainPine v3.0 336
AutoFact: PREDICTED: prolyl endopeptidase [Equus caballus] 5.99756e-43
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative prolyl endopeptidase 6.271e-09
Internal
sp_v3.0_unigene157100 SustainPine v3.0 558
AutoFact: DUF1645 domain containing protein 2.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene157128 SustainPine v3.0 456
AutoFact: PREDICTED: RNA-binding protein 5-like n=1 Tax=Anolis carolinensis RepID=UPI0002038949 2.0e-22
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene157172 SustainPine v3.0 195
AutoFact: Cell divisionFtsK/SpoIIIE n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FI23_FLAJ1 5.0e-26
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene157218 SustainPine v3.0 383
AutoFact: Plasma-membrane choline transporter family protein [Arabidopsis thaliana] gb|AAL24390.1| putative protein [Arabidopsis thaliana] gb|AAM47987.1| putative protein [Arabidopsis thaliana] gb|AEE86957.1| Plasma-membrane choline transporter family protein [Arab 2.0e-29
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Putative uncharacterized protein F20M13.200 1.929e-10
Internal
sp_v3.0_unigene157314 SustainPine v3.0 288
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene157321 SustainPine v3.0 361
AutoFact: Membrane protein, putative n=4 Tax=Pseudomonas putida RepID=Q88N34_PSEPK 6.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene157395 SustainPine v3.0 217
AutoFact: 3-hydroxybutyrate dehydrogenase n=1 Tax=Azospirillum sp. B510 RepID=D3P5B2_AZOS1 8.0e-11
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene157412 SustainPine v3.0 288
AutoFact: 1A family penicillin-binding protein n=1 Tax=Rubrivivax benzoatilyticus JA2 RepID=F3LKL9_9BURK 1.0e-38
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain