Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: tr=Predicted protein; subsp. trichocarpa).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene39128 SustainPine v3.0 509
AutoFact: inosine-uridine preferring nucleoside hydrolase family protein [Arabidopsis thaliana] gb|AAL84950.1| AT5g18860/F17K4_110 [Arabidopsis thaliana] gb|AAM91461.1| AT5g18860/F17K4_110 [Arabidopsis thaliana] gb|AED92622.1| inosine-uridine preferring nucleoside 1.0e-28
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene39151 SustainPine v3.0 346
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative C-terminus
sp_v3.0_unigene39520 SustainPine v3.0 229
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene39533 SustainPine v3.0 158
AutoFact: oxoglutarate dehydrogenase - like protein [Arabidopsis thaliana] 1.0e-18
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: 2-oxoglutarate dehydrogenase, E1 subunit 3.506e-09
Internal
sp_v3.0_unigene39543 SustainPine v3.0 239
AutoFact: putative beige protein [Oryza sativa Japonica Group] 3.0e-37
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene39611 SustainPine v3.0 281
AutoFact: Zinc finger, RING-type [Medicago truncatula] gb|ABN08833.1| Zinc finger, RING-type [Medicago truncatula] 1.0e-06
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene39637 SustainPine v3.0 112
AutoFact: GTP cyclohydrolase I [Solanum lycopersicum] 5.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: GTP cyclohydrolase 1 isoform TaA 2.032e-09
Internal
sp_v3.0_unigene39736 SustainPine v3.0 253
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene39887 SustainPine v3.0 438
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus
sp_v3.0_unigene39952 SustainPine v3.0 146
AutoFact: RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] emb|CAB41853.1| putative protein [Arabidopsis thaliana] gb|AEE78320.1| RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] 3.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene40045 SustainPine v3.0 187
AutoFact: Nucleic acid binding protein, putative n=1 Tax=Ricinus communis RepID=B9SAM9_RICCO 6.0e-14
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Nucleic acid binding protein, putative 2.259e-09
Internal
sp_v3.0_unigene40192 SustainPine v3.0 169
AutoFact: guanyl-nucleotide exchange factor / GTPase binding / GTP binding protein [Arabidopsis thaliana] gb|AAL74193.1|AF465831_1 putative guanine nucleotide exchange factor [Arabidopsis thaliana] gb|AEE83733.1| guanyl-nucleotide exchange factor / GTPase binding / 9.0e-18
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene40218 SustainPine v3.0 203
AutoFact: putative mitochondrial RNA helicase [Oryza sativa Japonica Group] 4.0e-25
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: RNA helicase like protein 2.695e-09
Internal
sp_v3.0_unigene40628 SustainPine v3.0 1578
AutoFact: PQ loop repeat-containing protein [Arabidopsis thaliana] gb|AAL86295.1| unknown protein [Arabidopsis thaliana] gb|AAM91683.1| unknown protein [Arabidopsis thaliana] gb|AEC09919.1| PQ loop repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative Complete
sp_v3.0_unigene40635 SustainPine v3.0 766
AutoFact: DUF761 multi-domain protein 3.0e-12
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
N-terminus
sp_v3.0_unigene40697 SustainPine v3.0 1232
AutoFact: leucyl-tRNA synthetase [Arabidopsis thaliana] gb|AAD36946.1|AF069441_6 putative leucyl tRNA synthetase [Arabidopsis thaliana] emb|CAB77903.1| putative leucyl tRNA synthetase [Arabidopsis thaliana] gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana] g 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
C-terminus
sp_v3.0_unigene40705 SustainPine v3.0 1548
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_001154290.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAK82548.1| AT4g36960/C7A10_400 [Arabidopsis thaliana] gb|AAN18142.1| At4g36960/C7A10_400 [Arabidopsis t 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Sma3: Heterogeneous nuclear ribonucleoprotein 27C 2.495e-09
Complete
sp_v3.0_unigene40784 SustainPine v3.0 910
AutoFact: DUF1680 domain containing protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene40794 SustainPine v3.0 566
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene40815 SustainPine v3.0 730
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain