|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v3.0_unigene16788
|
SustainPine v3.0
|
682
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene16842
|
SustainPine v3.0
|
2604
|
|
• AutoFact: nodulin family protein [Arabidopsis thaliana] gb|AAF27120.1|AC018849_8 nodulin-like protein; 38383-40406 [Arabidopsis thaliana] gb|AAK59618.1| putative nodulin protein [Arabidopsis thaliana] gb|AAL07191.1| putative nodulin protein [Arabidopsis thaliana] g
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Sma3: Nodulin-like protein
|
1.318e-11
|
|
Complete
|
|
sp_v3.0_unigene16893
|
SustainPine v3.0
|
1127
|
|
• AutoFact: maternal effect embryo arrest 22 [Arabidopsis thaliana] gb|AEC09020.1| maternal effect embryo arrest 22 [Arabidopsis thaliana]
|
5.0e-15
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene17404
|
SustainPine v3.0
|
695
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene17424
|
SustainPine v3.0
|
1907
|
|
• AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAF40452.1|AC004809_10 ESTs gb|N65605, gb|N38087, gb|T20485, gb|T13726, gb|N38339, gb|F15440 and gb|N97201 come from this gene [Arabidopsis thaliana] gb|AAL32687.1| Unknow
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Sma3: Ubiquitin-associated uba/ubx domain-containing protein, putative
|
6.042e-09
|
|
Complete
|
|
sp_v3.0_unigene17790
|
SustainPine v3.0
|
1438
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Sma3: TRAF type zinc finger domain containing 1
|
1.54e-09
|
|
Complete
|
|
sp_v3.0_unigene18082
|
SustainPine v3.0
|
2298
|
|
• AutoFact: GYF domain-containing protein [Arabidopsis thaliana] dbj|BAB09197.1| unnamed protein product [Arabidopsis thaliana] gb|AED94891.1| GYF domain-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Sma3: Gb|AAC80623.1
|
9.26e-06
|
|
C-terminus
|
|
sp_v3.0_unigene18642
|
SustainPine v3.0
|
693
|
|
• AutoFact: putative transcription factor [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
C-terminus
|
|
sp_v3.0_unigene18740
|
SustainPine v3.0
|
941
|
|
• AutoFact: DUF668 domain containing protein
|
3.0e-12
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene18894
|
SustainPine v3.0
|
1477
|
|
• AutoFact: pfam05875, Ceramidase, Ceramidase
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Sma3: Alkaline phytoceramidase, putative
|
3.114e-09
|
|
Complete
|
|
sp_v3.0_unigene19176
|
SustainPine v3.0
|
591
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Putative N-terminus
|
|
sp_v3.0_unigene19198
|
SustainPine v3.0
|
607
|
|
• AutoFact: LYR family of Fe/S cluster biogenesis protein [Arabidopsis thaliana] gb|AAF79817.1|AC007396_17 T4O12.27 [Arabidopsis thaliana] dbj|BAD95391.1| hypothetical protein [Arabidopsis thaliana] gb|ABF59193.1| unknown protein [Arabidopsis thaliana] gb|AEE35792.1|
|
8.0e-16
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene19335
|
SustainPine v3.0
|
664
|
|
• AutoFact: dentin sialophosphoprotein-like protein [Arabidopsis thaliana] gb|AEE76488.1| dentin sialophosphoprotein-like protein [Arabidopsis thaliana]
|
1.0e-16
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
N-terminus
|
|
sp_v3.0_unigene20378
|
SustainPine v3.0
|
1406
|
|
• AutoFact: glycolipid transfer protein 1 [Arabidopsis thaliana] ref|NP_973588.1| glycolipid transfer protein 1 [Arabidopsis thaliana] gb|AAB80664.1| expressed protein [Arabidopsis thaliana] gb|AAM63096.1| unknown [Arabidopsis thaliana] gb|AAO42225.1| unknown protein
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Sma3: Glycolipid transfer protein, putative
|
1.736e-09
|
|
Complete
|
|
sp_v3.0_unigene20872
|
SustainPine v3.0
|
438
|
|
• AutoFact: DET1- and DDB1-associated protein 1 [Arabidopsis thaliana] dbj|BAB11462.1| unnamed protein product [Arabidopsis thaliana] gb|AAP37690.1| At5g41560 [Arabidopsis thaliana] dbj|BAF00265.1| hypothetical protein [Arabidopsis thaliana] gb|AED94692.1| DET1- and
|
4.0e-29
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Complete
|
|
sp_v3.0_unigene20876
|
SustainPine v3.0
|
459
|
|
• AutoFact: similar to zinc finger protein 569, isoform CRA_a [Homo sapiens]
|
3.0e-24
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Misassembled
|
|
sp_v3.0_unigene21772
|
SustainPine v3.0
|
493
|
|
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB51411.1| putative protein [Arabidopsis thaliana] emb|CAB81228.1| putative protein [Arabidopsis thaliana] gb|AEE82991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Internal
|
|
sp_v3.0_unigene21933
|
SustainPine v3.0
|
520
|
|
• AutoFact: nuclear pore complex protein-like protein [Arabidopsis thaliana] dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana] gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana]
|
4.0e-07
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene21962
|
SustainPine v3.0
|
1713
|
|
• AutoFact: 3-deoxy-D-manno-octulosonic-acid transferase [Arabidopsis thaliana] gb|AAL38291.1| 3-deoxy-D-manno-octulosonic acid transferase-like protein [Arabidopsis thaliana] gb|AAM91158.1| 3-deoxy-D-manno-octulosonic acid transferase-like protein [Arabidopsis thali
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Putative Complete
|
|
sp_v3.0_unigene22079
|
SustainPine v3.0
|
652
|
|
• AutoFact: D-alanine--D-alanine ligase family protein [Arabidopsis thaliana] gb|AEE74684.1| D-alanine--D-alanine ligase family protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
Internal
|
