Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene2729 SustainPine v3.0 2104
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Complete
sp_v3.0_unigene8540 SustainPine v3.0 1990
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
• Sma3: 4-coumaroyl-CoA synthase 0.0
Complete
sp_v3.0_unigene31876 SustainPine v3.0 1998
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
Putative Complete
sp_v3.0_unigene51455 SustainPine v3.0 646
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 1.0e-23
• FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: 4-coumarate:CoA ligase 1.523e-06
Internal
sp_v3.0_unigene74531 SustainPine v3.0 234
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 3.0e-13
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
Internal
sp_v3.0_unigene77158 SustainPine v3.0 255
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 4.0e-11
• FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Internal
sp_v3.0_unigene79990 SustainPine v3.0 304
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 2.0e-22
• FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Internal
sp_v3.0_unigene127584 SustainPine v3.0 942
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 3.697e-38
Misassembled
sp_v3.0_unigene132918 SustainPine v3.0 518
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 3.0e-23
• FL-Next: tr=4-coumarate:CoA ligase; Pinus massoniana. 0.0
• Sma3: 4-coumarate:CoA ligase 1.007e-34
Internal
sp_v3.0_unigene135683 SustainPine v3.0 451
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 1.0e-19
• FL-Next: tr=4-coumarate-CoA ligase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
C-terminus
sp_v3.0_unigene142464 SustainPine v3.0 1091
• AutoFact: 4-coumarate--CoA ligase n=18 Tax=Pinaceae RepID=4CL_PINTA 0.0
• FL-Next: sp=4-coumarate--CoA ligase; Pinus taeda (Loblolly pine). 0.0
• Sma3: 4-coumarate:CoA ligase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain