Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene1249 SustainPine v3.0 2438
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 4.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 1.488e-14
Putative Complete
sp_v3.0_unigene1809 SustainPine v3.0 1238
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Putative N6-adenosine-methyltransferase MT-A70-like 7.31e-06
N-terminus
sp_v3.0_unigene2660 SustainPine v3.0 1486
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 5.0e-10
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Transcriptional corepressor LEUNIG 1.005e-07
N-terminus
sp_v3.0_unigene11481 SustainPine v3.0 2179
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
C-terminus
sp_v3.0_unigene13997 SustainPine v3.0 2364
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 3.0e-06
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 15a; Arabidopsis thaliana (Mouse-ear cress). 0.0
Sma3: Putative uncharacterized protein At1g15780 8.285e-06
N-terminus
sp_v3.0_unigene14013 SustainPine v3.0 1426
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 1.0e-05
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 15a; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene30788 SustainPine v3.0 1905
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 5.0e-13
FL-Next: sp=Mediator of RNA polymerase II transcription subunit 15a; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
sp_v3.0_unigene40480 SustainPine v3.0 2365
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 5.0e-31
FL-Next: tr=Coatomer subunit zeta-3; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
N-terminus
sp_v3.0_unigene47326 SustainPine v3.0 340
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 1.0e-07
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Internal
sp_v3.0_unigene47775 SustainPine v3.0 556
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 1.0e-20
Sma3: Truncated glutenin HMW subunit 1Dx 4.873e-06
coding
sp_v3.0_unigene77283 SustainPine v3.0 448
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 9.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene100837 SustainPine v3.0 1088
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 3.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: CTV.22 5.848e-06
Putative Complete
sp_v3.0_unigene140406 SustainPine v3.0 1203
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Chromosome chr13 scaffold_120, whole genome shotgun sequence 3.854e-07
Putative Complete
sp_v3.0_unigene143290 SustainPine v3.0 609
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene179231 SustainPine v3.0 378
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 5.0e-05
putative_coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain