Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene3901 SustainPine v3.0 576
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 6.0e-05
putative_coding
sp_v3.0_unigene45899 SustainPine v3.0 659
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 1.0e-34
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
C-terminus
sp_v3.0_unigene46202 SustainPine v3.0 382
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
sp_v3.0_unigene50144 SustainPine v3.0 342
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene55642 SustainPine v3.0 371
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 3.0e-13
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene64326 SustainPine v3.0 215
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus
sp_v3.0_unigene66674 SustainPine v3.0 408
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 6.0e-12
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Putative Complete
sp_v3.0_unigene68461 SustainPine v3.0 361
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 3.0e-13
FL-Next: tr=Putative gag-pol; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene69772 SustainPine v3.0 162
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Internal
sp_v3.0_unigene70235 SustainPine v3.0 394
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 5.0e-18
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene71068 SustainPine v3.0 377
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 2.0e-08
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene71095 SustainPine v3.0 421
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
C-terminus
sp_v3.0_unigene71265 SustainPine v3.0 250
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 8.0e-11
FL-Next: tr=Retrotransposon protein, putative, unclassified; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene75428 SustainPine v3.0 244
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 2.0e-08
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene77583 SustainPine v3.0 346
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene104639 SustainPine v3.0 394
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Internal
sp_v3.0_unigene108932 SustainPine v3.0 254
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 2.0e-10
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene123478 SustainPine v3.0 434
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 2.0e-15
FL-Next: tr=Putative gag-pol; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene126135 SustainPine v3.0 297
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Putative C-terminus
sp_v3.0_unigene136481 SustainPine v3.0 355
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain