Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene22092 SustainPine v3.0 847
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Gag-Pol polyprotein 1.126e-11
Internal
sp_v3.0_unigene53979 SustainPine v3.0 405
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 5.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 8.655e-35
Putative N-terminus
sp_v3.0_unigene68566 SustainPine v3.0 334
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 6.0e-39
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 5.604e-18
Internal
sp_v3.0_unigene132473 SustainPine v3.0 588
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 2.0e-25
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
Internal
sp_v3.0_unigene135476 SustainPine v3.0 203
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 3.0e-11
• FL-Next: tr=At2g06190; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Sma3: At2g06190 2.924e-06
Putative N-terminus
sp_v3.0_unigene160982 SustainPine v3.0 355
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 2.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Retrotransposon protein, putative, Ty3-gypsy subclass 4.895e-39
Putative Complete
sp_v3.0_unigene161039 SustainPine v3.0 314
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 2.0e-21
• FL-Next: tr=Putative retroelement; Oryza sativa subsp. japonica (Rice). 0.0
• Sma3: Gag-Pol polyprotein 6.502e-11
Internal
sp_v3.0_unigene167934 SustainPine v3.0 264
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 6.0e-19
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Sma3: Gag-Pol polyprotein 5.352e-08
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain