Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: copia-like retrotransposable element [Arabidopsis thaliana]

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v3.0_unigene25169 SustainPine v3.0 265
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 7.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene40953 SustainPine v3.0 311
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene57386 SustainPine v3.0 335
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 2.0e-07
FL-Next: tr=Uncharacterized protein; Phytophthora ramorum (Sudden oak death agent). 0.0
Internal
sp_v3.0_unigene58493 SustainPine v3.0 180
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 2.0e-07
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Internal
sp_v3.0_unigene65235 SustainPine v3.0 233
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene109344 SustainPine v3.0 355
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene139739 SustainPine v3.0 465
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene159842 SustainPine v3.0 294
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
sp_v3.0_unigene160847 SustainPine v3.0 452
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 4.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Sma3: Retrotransposon protein, putative, Ty1-copia subclass 1.13e-19
Internal
sp_v3.0_unigene161602 SustainPine v3.0 243
AutoFact: copia-like retrotransposable element [Arabidopsis thaliana] 7.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain