Sustainpine_db
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Assembly Name: SustainPine v3.0

Name: pfam01535, PPR, PPR repeat

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v3.0_unigene4541 SustainPine v3.0 871
• AutoFact: pfam01535, PPR, PPR repeat 4.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 8.677e-13
Putative C-terminus
sp_v3.0_unigene9662 SustainPine v3.0 641
• AutoFact: pfam01535, PPR, PPR repeat 1.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative Complete
sp_v3.0_unigene14686 SustainPine v3.0 286
• AutoFact: pfam01535, PPR, PPR repeat 9.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 8.376e-20
Internal
sp_v3.0_unigene19763 SustainPine v3.0 400
• AutoFact: pfam01535, PPR, PPR repeat 6.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene37172 SustainPine v3.0 327
• AutoFact: pfam01535, PPR, PPR repeat 8.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Chromosome chr12 scaffold_36, whole genome shotgun sequence 7.822e-06
Internal
sp_v3.0_unigene39614 SustainPine v3.0 363
• AutoFact: pfam01535, PPR, PPR repeat 3.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.87e-10
Internal
sp_v3.0_unigene42674 SustainPine v3.0 468
• AutoFact: pfam01535, PPR, PPR repeat 6.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.473e-18
Internal
sp_v3.0_unigene47851 SustainPine v3.0 1419
• AutoFact: pfam01535, PPR, PPR repeat 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide, putative, expressed 1.998e-10
Putative C-terminus
sp_v3.0_unigene49426 SustainPine v3.0 149
• AutoFact: pfam01535, PPR, PPR repeat 5.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene49732 SustainPine v3.0 679
• AutoFact: pfam01535, PPR, PPR repeat 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 1.54143e-44
Internal
sp_v3.0_unigene51773 SustainPine v3.0 455
• AutoFact: pfam01535, PPR, PPR repeat 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 7.559e-18
Internal
sp_v3.0_unigene53312 SustainPine v3.0 315
• AutoFact: pfam01535, PPR, PPR repeat 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 6.036e-06
Internal
sp_v3.0_unigene53868 SustainPine v3.0 426
• AutoFact: pfam01535, PPR, PPR repeat 7.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene54649 SustainPine v3.0 239
• AutoFact: pfam01535, PPR, PPR repeat 4.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 3.294e-14
Internal
sp_v3.0_unigene54720 SustainPine v3.0 115
• AutoFact: pfam01535, PPR, PPR repeat 6.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene55012 SustainPine v3.0 187
• AutoFact: pfam01535, PPR, PPR repeat 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene56564 SustainPine v3.0 454
• AutoFact: pfam01535, PPR, PPR repeat 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene57285 SustainPine v3.0 180
• AutoFact: pfam01535, PPR, PPR repeat 4.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
sp_v3.0_unigene57998 SustainPine v3.0 453
• AutoFact: pfam01535, PPR, PPR repeat 2.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v3.0_unigene58027 SustainPine v3.0 403
• AutoFact: pfam01535, PPR, PPR repeat 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Sma3: Pentatricopeptide repeat-containing protein, putative 4.712e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain