Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: copia ltr rider

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene30307 SustainPine v2.0 575
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia ltr rider 0.0
Internal
sp_v2.0_unigene46157 SustainPine v2.0 127
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 9.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia ltr rider 5.19715e-11
Internal
sp_v2.0_unigene83685 SustainPine v2.0 509
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 4.0e-17
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: copia ltr rider 4.38751e-19
Putative N-terminus
sp_v2.0_unigene83712 SustainPine v2.0 498
AutoFact: Putative retrovirus-related polyprotein (Fragment) n=1 Tax=Lithospermum erythrorhizon RepID=O65173_LITER 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia ltr rider 9.2062e-20
Internal
sp_v2.0_unigene83762 SustainPine v2.0 327
AutoFact: Putative retrovirus-related polyprotein (Fragment) n=1 Tax=Lithospermum erythrorhizon RepID=O65173_LITER 7.0e-10
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00300; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: copia ltr rider 7.67442e-12
Internal
sp_v2.0_unigene83769 SustainPine v2.0 405
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 3.0e-10
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia ltr rider 1.88263e-11
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain