Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: non-ltr retroelement reverse transcriptase

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene13170 SustainPine v2.0 821
AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Sorghum bicolor RepID=Q1KSC2_SORBI 1.0e-07
FL-Next: tr=Putative uncharacterized protein Sb08g016940; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: non-ltr retroelement reverse transcriptase 1.71573e-07
Internal
sp_v2.0_unigene26747 SustainPine v2.0 474
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 8.0e-25
FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: non-ltr retroelement reverse transcriptase 1.22024e-30
Internal
sp_v2.0_unigene29459 SustainPine v2.0 513
AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=Q9SIQ5_ARATH 9.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: non-ltr retroelement reverse transcriptase 1.27301e-16
Putative Complete
sp_v2.0_unigene29797 SustainPine v2.0 475
AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Sorghum bicolor RepID=Q1KSC2_SORBI 4.0e-10
FL-Next: sp=Putative ribonuclease H protein At1g65750; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: non-ltr retroelement reverse transcriptase 5.43511e-11
Putative N-terminus
sp_v2.0_unigene53786 SustainPine v2.0 324
AutoFact: F21E10.5 protein n=1 Tax=Arabidopsis thaliana RepID=O65244_ARATH 4.0e-10
FL-Next: tr=F21E10.5 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: non-ltr retroelement reverse transcriptase 9.81262e-12
Internal
sp_v2.0_unigene58422 SustainPine v2.0 371
AutoFact: Ty1_Copia-element protein n=1 Tax=Arabidopsis thaliana RepID=A7Y5V7_ARATH 4.0e-13
FL-Next: sp=Putative ribonuclease H protein At1g65750; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: non-ltr retroelement reverse transcriptase 4.61422e-15
Putative N-terminus
sp_v2.0_unigene71617 SustainPine v2.0 301
AutoFact: F21E10.5 protein n=1 Tax=Arabidopsis thaliana RepID=O65244_ARATH 3.0e-11
FL-Next: tr=Putative uncharacterized protein T18B22.50; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: non-ltr retroelement reverse transcriptase 9.62241e-14
Putative N-terminus
sp_v2.0_unigene74259 SustainPine v2.0 387
AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=O22220_ARATH 2.0e-22
FL-Next: sp=Uncharacterized mitochondrial protein AtMg01250; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: non-ltr retroelement reverse transcriptase 1.07434e-27
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain