Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: reverse transcriptase

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene8003 SustainPine v2.0 813
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 5.0e-18
• FL-Next: sp=60S ribosomal protein L31; Picea mariana (Black spruce) (Abies mariana). 0.0
• Blast2go: reverse transcriptase 2.24314e-20
N-terminus
sp_v2.0_unigene13200 SustainPine v2.0 618
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 3.0e-30
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 5.32025e-30
Putative Complete
sp_v2.0_unigene13281 SustainPine v2.0 131
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.73073e-14
Internal
sp_v2.0_unigene13315 SustainPine v2.0 486
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.56398e-40
Internal
sp_v2.0_unigene13340 SustainPine v2.0 293
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Peperomia caperata RepID=Q56GE9_PEPCA 3.0e-32
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 3.62936e-43
Putative N-terminus
sp_v2.0_unigene14990 SustainPine v2.0 282
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Silene latifolia RepID=Q8W3R2_SILLA 9.0e-13
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 1.46805e-17
Internal
sp_v2.0_unigene19753 SustainPine v2.0 307
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 9.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 3.77235e-11
Internal
sp_v2.0_unigene20207 SustainPine v2.0 313
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.18711e-39
Internal
sp_v2.0_unigene26741 SustainPine v2.0 349
• AutoFact: Polyprotein (Fragment) n=1 Tax=Ananas comosus RepID=B4YF15_ANACO 8.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.96182e-44
Putative Complete
sp_v2.0_unigene26804 SustainPine v2.0 487
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 0.0
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
• Blast2go: reverse transcriptase 0.0
Internal
sp_v2.0_unigene33056 SustainPine v2.0 316
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 8.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.72695e-36
Internal
sp_v2.0_unigene38166 SustainPine v2.0 589
• AutoFact: Polyprotein n=1 Tax=Glycine max RepID=Q84ZV5_SOYBN 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 0.0
Putative Complete
sp_v2.0_unigene41515 SustainPine v2.0 388
• AutoFact: Reverse transcriptase (Fragment) n=7 Tax=Prunus mume RepID=C8C9R0_PRUMU 1.99965e-42
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 0.0
Putative Complete
sp_v2.0_unigene41554 SustainPine v2.0 765
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ45_CYCRE 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.98241e-12
Putative N-terminus
sp_v2.0_unigene42076 SustainPine v2.0 440
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus strobus RepID=O65877_PINST 3.0e-38
• FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: reverse transcriptase 0.0
Internal
sp_v2.0_unigene42602 SustainPine v2.0 293
• AutoFact: Putative gag-pol polyprotein, identical n=2 Tax=Solanum demissum RepID=Q5NRP4_SOLDE 1.0e-15
• FL-Next: tr=Putative gag-pol polyprotein, identical; Solanum demissum (Wild potato). 0.0
• Blast2go: reverse transcriptase 1.22791e-19
Internal
sp_v2.0_unigene43992 SustainPine v2.0 389
• AutoFact: putative polyprotein [Zea mays] 3.00004e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 0.0
Complete
sp_v2.0_unigene44427 SustainPine v2.0 402
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: reverse transcriptase 6.23196e-07
Putative Complete
sp_v2.0_unigene44480 SustainPine v2.0 282
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 2.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 3.03615e-23
Internal
sp_v2.0_unigene47973 SustainPine v2.0 559
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY09_PICAB 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 4.60905e-09
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain