Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: reverse transcriptase

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene57279 SustainPine v2.0 191
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q75IK3_ORYSJ 8.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 9.73616e-22
Internal
sp_v2.0_unigene57348 SustainPine v2.0 364
• AutoFact: reverse transcriptase [Cycas revoluta] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 0.0
Putative Complete
sp_v2.0_unigene58202 SustainPine v2.0 249
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cryptomeria japonica RepID=Q9ZRK2_CRYJA 5.0e-11
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 1.07087e-10
Internal
sp_v2.0_unigene58907 SustainPine v2.0 191
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 3.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 6.00486e-38
Internal
sp_v2.0_unigene63440 SustainPine v2.0 541
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 3.50829e-41
Putative N-terminus
sp_v2.0_unigene64854 SustainPine v2.0 489
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 1.0e-21
• FL-Next: tr=Putative uncharacterized protein P0431G05.11; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: reverse transcriptase 1.60354e-26
Internal
sp_v2.0_unigene65066 SustainPine v2.0 383
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 0.0
Internal
sp_v2.0_unigene66017 SustainPine v2.0 363
• AutoFact: Polyprotein n=1 Tax=Dahlia mosaic virus D10 RepID=F5A7G0_9VIRU 7.0e-10
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: reverse transcriptase 1.54045e-11
C-terminus
sp_v2.0_unigene66152 SustainPine v2.0 492
• AutoFact: RVT_1 domain containing protein 2.0e-09
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 0.0
Putative Complete
sp_v2.0_unigene66457 SustainPine v2.0 387
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 2.0e-20
• FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: reverse transcriptase 4.78311e-20
Internal
sp_v2.0_unigene68560 SustainPine v2.0 389
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 2.6263e-21
Internal
sp_v2.0_unigene68842 SustainPine v2.0 385
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus coulteri RepID=Q06298_PINCU 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 4.71458e-36
Internal
sp_v2.0_unigene68955 SustainPine v2.0 319
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q56GE2_GINBI 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: reverse transcriptase 4.2316e-09
Internal
sp_v2.0_unigene69253 SustainPine v2.0 336
• AutoFact: reverse transcriptase [Ginkgo biloba] 8.0e-35
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 8.40779e-45
Putative C-terminus
sp_v2.0_unigene69255 SustainPine v2.0 263
• AutoFact: RVT_1 domain containing protein 4.0e-05
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 2.98382e-23
Putative C-terminus
sp_v2.0_unigene70946 SustainPine v2.0 412
• AutoFact: Putative non-LTR retroelement reverse transcriptase n=1 Tax=Arabidopsis thaliana RepID=Q9ZUF0_ARATH 1.0e-07
• FL-Next: tr=Putative non-LTR retroelement reverse transcriptase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: reverse transcriptase 1.81992e-08
Internal
sp_v2.0_unigene71028 SustainPine v2.0 439
• AutoFact: PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform 4 n=2 Tax=Canis lupus familiaris RepID=UPI00005A34CA 5.0e-16
• Blast2go: reverse transcriptase 4.43836e-22
unknown
sp_v2.0_unigene71429 SustainPine v2.0 271
• AutoFact: RVT_1 domain containing protein 3.0e-10
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 8.96781e-34
Putative N-terminus
sp_v2.0_unigene71516 SustainPine v2.0 336
• AutoFact: Reverse transcriptase (Fragment) n=4 Tax=Ginkgo biloba RepID=Q06290_GINBI 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 1.35611e-33
Internal
sp_v2.0_unigene71852 SustainPine v2.0 350
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 5.0e-30
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
• Blast2go: reverse transcriptase 9.06569e-30
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain