Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: reverse transcriptase

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene48040 SustainPine v2.0 421
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 4.2039e-45
Internal
sp_v2.0_unigene48609 SustainPine v2.0 173
• AutoFact: Reverse transcriptase family protein n=1 Tax=Asparagus officinalis RepID=Q2AA00_ASPOF 2.0e-10
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 7.29705e-14
Putative N-terminus
sp_v2.0_unigene51087 SustainPine v2.0 199
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: reverse transcriptase 1.05371e-13
Internal
sp_v2.0_unigene51875 SustainPine v2.0 507
• AutoFact: Gag/pol polyprotein n=3 Tax=Pisum sativum RepID=Q6WAY3_PEA 1.0e-36
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 5.48468e-42
Putative Complete
sp_v2.0_unigene51919 SustainPine v2.0 275
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 2.0e-13
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 9.71939e-18
Putative N-terminus
sp_v2.0_unigene52400 SustainPine v2.0 256
• AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6UUH7_ORYSJ 6.0e-23
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: reverse transcriptase 8.9018e-26
Putative N-terminus
sp_v2.0_unigene52573 SustainPine v2.0 236
• AutoFact: Reverse transcriptase (Fragment) n=2 Tax=Spermatophyta RepID=P93687_SECCE 7.0e-16
• FL-Next: tr=Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase aspartic, catalytic; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
• Blast2go: reverse transcriptase 1.45715e-15
Internal
sp_v2.0_unigene52818 SustainPine v2.0 345
• AutoFact: Putative plant disease resistance polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q8LMQ3_ORYSJ 2.0e-05
• FL-Next: tr=OSJNBb0033G08.8 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: reverse transcriptase 8.07979e-07
Internal
sp_v2.0_unigene52920 SustainPine v2.0 413
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY11_PICAB 4.0e-25
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 2.45181e-32
Internal
sp_v2.0_unigene53189 SustainPine v2.0 344
• AutoFact: putative reverse trasncriptase [Cranberry red ringspot virus] 8.0e-13
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: reverse transcriptase 2.17599e-13
Internal
sp_v2.0_unigene53869 SustainPine v2.0 216
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: reverse transcriptase 1.67183e-14
Internal
sp_v2.0_unigene53958 SustainPine v2.0 562
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus elliottii RepID=O65863_PINEL 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: reverse transcriptase 3.40611e-22
Internal
sp_v2.0_unigene54093 SustainPine v2.0 113
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 1.0e-06
• Blast2go: reverse transcriptase 6.59805e-10
unknown
sp_v2.0_unigene54915 SustainPine v2.0 228
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Cycas revoluta RepID=Q4JQ46_CYCRE 6.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 3.67401e-30
Internal
sp_v2.0_unigene54974 SustainPine v2.0 423
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Pinus strobus RepID=O65877_PINST 4.0e-29
• FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
• Blast2go: reverse transcriptase 1.07236e-32
Internal
sp_v2.0_unigene56280 SustainPine v2.0 246
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QP36_ORYSJ 1.0e-28
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: reverse transcriptase 1.43514e-35
Internal
sp_v2.0_unigene56297 SustainPine v2.0 371
• AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 7.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 8.86634e-27
Putative N-terminus
sp_v2.0_unigene56313 SustainPine v2.0 160
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 6.07325e-17
Putative Complete
sp_v2.0_unigene56420 SustainPine v2.0 235
• AutoFact: WS0345.C21_N12 WS-SE-N-A-19 Picea glauca cDNA clone WS0345_N12 3, mRNA sequence. 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Triticum aestivum (Wheat). 0.0
• Blast2go: reverse transcriptase 1.6112e-09
Internal
sp_v2.0_unigene56644 SustainPine v2.0 277
• AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Taxus baccata RepID=Q56GF5_TAXBA 5.0e-10
• FL-Next: tr=Putative uncharacterized protein Sb0012s014620; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: reverse transcriptase 2.88151e-13
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain