Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: rna binding protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1449 SustainPine v2.0 1355
AutoFact: OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] gb|AEC09877.1| OB-fold nucleic acid binding domain-containing protein [Arabidopsis thaliana] 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v2.0_unigene1474 SustainPine v2.0 1895
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v2.0_unigene2543 SustainPine v2.0 1300
AutoFact: putative agenet domain-containing protein [Oryza sativa Japonica Group] dbj|BAD38428.1| putative agenet domain-containing protein [Oryza sativa Japonica Group] gb|EAZ22156.1| hypothetical protein OsJ_05817 [Oryza sativa Japonica Group] dbj|BAG91727.1| unn 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Putative Complete
sp_v2.0_unigene5775 SustainPine v2.0 759
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 9.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 7.99877e-40
N-terminus
sp_v2.0_unigene7680 SustainPine v2.0 1829
AutoFact: agenet domain-containing protein [Arabidopsis thaliana] gb|AAY34173.1| At1g09320 [Arabidopsis thaliana] gb|AEE28429.1| agenet domain-containing protein [Arabidopsis thaliana] 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v2.0_unigene8492 SustainPine v2.0 1210
AutoFact: RNA binding protein n=3 Tax=Andropogoneae RepID=B6TN55_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Putative C-terminus
sp_v2.0_unigene9243 SustainPine v2.0 1074
AutoFact: Agenet domain containing protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
N-terminus
sp_v2.0_unigene15356 SustainPine v2.0 1093
AutoFact: RNA binding protein [Nicotiana sylvestris] gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum] 2.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v2.0_unigene15986 SustainPine v2.0 1020
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59923.1| unknown protein [Arabidopsis thaliana] gb|AAM20239.1| unknown protein [Arabidopsis thaliana] gb|AAM62467.1| unkno 7.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v2.0_unigene19776 SustainPine v2.0 1211
AutoFact: RNA binding protein n=1 Tax=Zea mays RepID=B6T9D3_MAIZE 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
Complete
sp_v2.0_unigene25041 SustainPine v2.0 1275
AutoFact: ENT domain containing protein 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 1.90027e-13
Putative Complete
sp_v2.0_unigene28246 SustainPine v2.0 1299
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S4Q9_RICCO 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 2.12572e-25
Complete
sp_v2.0_unigene31014 SustainPine v2.0 1290
AutoFact: ENT domain containing protein 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 1.96821e-13
Putative Complete
sp_v2.0_unigene33551 SustainPine v2.0 642
AutoFact: RNA binding protein n=4 Tax=Andropogoneae RepID=B6U6Y1_MAIZE 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 3.04794e-26
N-terminus
sp_v2.0_unigene35927 SustainPine v2.0 727
AutoFact: RNA binding protein n=1 Tax=Zea mays RepID=B6T9D3_MAIZE 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 7.34968e-22
C-terminus
sp_v2.0_unigene67113 SustainPine v2.0 261
AutoFact: RNA binding protein n=2 Tax=Zea mays RepID=B6T7I1_MAIZE 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 2.28158e-36
Internal
sp_v2.0_unigene67937 SustainPine v2.0 455
AutoFact: ENT domain containing protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 1.01183e-11
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain