Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: retrotransposon unclassified

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene55368 SustainPine v2.0 378
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.71111e-27
Internal
sp_v2.0_unigene55464 SustainPine v2.0 315
AutoFact: Os08g0133100 protein n=2 Tax=Oryza sativa RepID=Q0J867_ORYSJ 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 3.90117e-19
Internal
sp_v2.0_unigene55798 SustainPine v2.0 458
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I5H9_ORYSJ 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.21398e-20
Putative Complete
sp_v2.0_unigene55874 SustainPine v2.0 335
AutoFact: OSJNBa0091D06.3 protein n=1 Tax=Oryza sativa RepID=Q7XQR1_ORYSA 1.0e-08
FL-Next: tr=H0502G05.7 protein; Oryza sativa (Rice). 0.0
Blast2go: retrotransposon unclassified 6.27826e-10
Internal
sp_v2.0_unigene55902 SustainPine v2.0 539
AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
sp_v2.0_unigene55950 SustainPine v2.0 261
AutoFact: Polyprotein n=2 Tax=Primula vulgaris RepID=A5X2S4_9ERIC 2.0e-21
FL-Next: tr=Polyprotein; Primula vulgaris. 0.0
Blast2go: retrotransposon unclassified 6.74239e-26
Internal
sp_v2.0_unigene56007 SustainPine v2.0 229
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 1.37214e-16
Internal
sp_v2.0_unigene56535 SustainPine v2.0 279
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 3.52654e-11
Putative C-terminus
sp_v2.0_unigene57125 SustainPine v2.0 312
AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.63894e-20
Internal
sp_v2.0_unigene58155 SustainPine v2.0 254
AutoFact: putative polyprotein [Oryza sativa Japonica Group] 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.32707e-15
Internal
sp_v2.0_unigene58884 SustainPine v2.0 324
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 4.46849e-18
Internal
sp_v2.0_unigene59163 SustainPine v2.0 282
AutoFact: Putative retrotransposon protein n=1 Tax=Phyllostachys edulis RepID=D3IVG4_9POAL 8.0e-14
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Blast2go: retrotransposon unclassified 1.44258e-16
Internal
sp_v2.0_unigene59315 SustainPine v2.0 298
AutoFact: F6N18.1 n=1 Tax=Arabidopsis thaliana RepID=Q9LPK1_ARATH 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 2.71038e-24
Internal
sp_v2.0_unigene59408 SustainPine v2.0 880
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
sp_v2.0_unigene59525 SustainPine v2.0 798
AutoFact: OSJNBa0035M09.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XNY0_ORYSJ 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 6.82585e-09
Putative Complete
sp_v2.0_unigene59765 SustainPine v2.0 276
AutoFact: Integrase n=1 Tax=Cucumis melo subsp. melo RepID=A6YTD9_CUCME 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 9.72362e-19
Internal
sp_v2.0_unigene59828 SustainPine v2.0 434
AutoFact: OSJNBa0054D14.1 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XW39_ORYSJ 2.0e-20
FL-Next: tr=OSJNBa0054D14.1 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 3.12789e-26
Internal
sp_v2.0_unigene59883 SustainPine v2.0 280
AutoFact: Gag-pol polyprotein, putative [Solanum demissum] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.40285e-30
Internal
sp_v2.0_unigene60008 SustainPine v2.0 546
AutoFact: rve domain containing protein 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.98564e-42
Internal
sp_v2.0_unigene60040 SustainPine v2.0 866
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain