Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: retrotransposon unclassified

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene43809 SustainPine v2.0 400
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 1.52841e-22
Putative C-terminus
sp_v2.0_unigene43836 SustainPine v2.0 710
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q7XCU0_ORYSJ 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Beta vulgaris subsp. vulgaris. 0.0
Blast2go: retrotransposon unclassified 8.86322e-14
Internal
sp_v2.0_unigene44128 SustainPine v2.0 329
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 4.5748e-22
N-terminus
sp_v2.0_unigene44278 SustainPine v2.0 254
AutoFact: Retrotransposon protein, putative, unclassified n=4 Tax=Oryza sativa RepID=Q10I89_ORYSJ 2.0e-10
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 7.44104e-14
Internal
sp_v2.0_unigene44520 SustainPine v2.0 312
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa RepID=Q10KL1_ORYSJ 5.0e-15
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: retrotransposon unclassified 1.80151e-17
Putative C-terminus
sp_v2.0_unigene44539 SustainPine v2.0 679
AutoFact: Gag-pol polyprotein, putative n=1 Tax=Solanum demissum RepID=Q6L3Y5_SOLDE 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 4.95449e-36
Internal
sp_v2.0_unigene44542 SustainPine v2.0 279
AutoFact: Os08g0164800 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0J7S9_ORYSJ 7.0e-12
FL-Next: tr=Putative retrotransposon protein; Phyllostachys edulis. 0.0
Blast2go: retrotransposon unclassified 5.10607e-14
Putative C-terminus
sp_v2.0_unigene45192 SustainPine v2.0 395
AutoFact: OSJNBa0053B21.11 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XKR0_ORYSJ 4.0e-31
FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
Blast2go: retrotransposon unclassified 2.73259e-36
Putative Complete
sp_v2.0_unigene45442 SustainPine v2.0 632
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q6I5H9_ORYSJ 4.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.35699e-30
Putative C-terminus
sp_v2.0_unigene45487 SustainPine v2.0 738
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q53NA3_ORYSJ 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 3.75974e-13
Putative Complete
sp_v2.0_unigene45610 SustainPine v2.0 406
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q7XEK0_ORYSJ 2.0e-12
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 1.92737e-17
Internal
sp_v2.0_unigene45760 SustainPine v2.0 428
AutoFact: Retrotransposon protein, putative, unclassified n=1 Tax=Oryza sativa Japonica Group RepID=Q2QXM6_ORYSJ 2.0e-25
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 4.18526e-29
Internal
sp_v2.0_unigene46215 SustainPine v2.0 541
AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9ZQE9_ARATH 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 0.0
Internal
sp_v2.0_unigene46720 SustainPine v2.0 466
AutoFact: Copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI2_SOYBN 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 4.92527e-16
N-terminus
sp_v2.0_unigene46782 SustainPine v2.0 463
AutoFact: Putative copia-type polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q9FWI2_ORYSJ 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 6.32514e-18
Putative C-terminus
sp_v2.0_unigene47024 SustainPine v2.0 461
AutoFact: Retrotransposon protein, putative, unclassified n=16 Tax=Oryza RepID=Q2R0G5_ORYSJ 3.0e-36
FL-Next: tr=Similar to Arabidopsis thaliana chromosome II BAC F26H6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 5.73411e-42
Internal
sp_v2.0_unigene47028 SustainPine v2.0 397
AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: retrotransposon unclassified 1.05888e-26
Internal
sp_v2.0_unigene47611 SustainPine v2.0 366
AutoFact: Putative polyprotein n=1 Tax=Oryza sativa Japonica Group RepID=Q7Y141_ORYSJ 2.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 5.57728e-13
C-terminus
sp_v2.0_unigene47624 SustainPine v2.0 548
AutoFact: OSJNBa0061G20.16 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XME3_ORYSJ 5.0e-18
FL-Next: tr=OSJNBa0061G20.16 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: retrotransposon unclassified 8.64678e-18
Internal
sp_v2.0_unigene47752 SustainPine v2.0 479
AutoFact: Retrotransposon protein, putative, unclassified n=2 Tax=Oryza sativa Japonica Group RepID=Q10C26_ORYSJ 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 4.06967e-11
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain