Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: transmembrane protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1732 SustainPine v2.0 1091
AutoFact: DUF962 domain containing protein 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Complete
sp_v2.0_unigene3504 SustainPine v2.0 530
AutoFact: CytochromB561_N domain containing protein 5.0e-09
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: transmembrane protein 5.08816e-08
N-terminus
sp_v2.0_unigene7894 SustainPine v2.0 1480
AutoFact: DUF778 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Complete
sp_v2.0_unigene10340 SustainPine v2.0 2079
AutoFact: WS02836.CR_K07 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02836_K07 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
sp_v2.0_unigene13735 SustainPine v2.0 1626
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Complete
sp_v2.0_unigene14692 SustainPine v2.0 635
AutoFact: transmembrane protein-like protein [Arabidopsis thaliana] gb|AAL58939.1|AF462853_1 At2g46060/T3F17.29 [Arabidopsis thaliana] gb|AEC10638.1| transmembrane protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transmembrane protein 0.0
Internal
sp_v2.0_unigene15057 SustainPine v2.0 1589
AutoFact: Rab5-interacting family protein [Arabidopsis thaliana] gb|AAK32862.1|AF361850_1 AT5g49540/K6M13_9 [Arabidopsis thaliana] gb|AAM91062.1| AT5g49540/K6M13_9 [Arabidopsis thaliana] gb|AED95827.1| Rab5-interacting family protein [Arabidopsis thaliana] 6.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Complete
sp_v2.0_unigene23157 SustainPine v2.0 758
AutoFact: Predicted membrane protein n=4 Tax=Malpighiales RepID=B9HWL1_POPTR 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
C-terminus
sp_v2.0_unigene27009 SustainPine v2.0 1611
AutoFact: [S] COG2119 Predicted membrane protein 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Complete
sp_v2.0_unigene46848 SustainPine v2.0 586
AutoFact: transmembrane protein-like protein [Arabidopsis thaliana] gb|AAL58939.1|AF462853_1 At2g46060/T3F17.29 [Arabidopsis thaliana] gb|AEC10638.1| transmembrane protein-like protein [Arabidopsis thaliana] 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transmembrane protein 9.16262e-22
Putative N-terminus
sp_v2.0_unigene63629 SustainPine v2.0 578
AutoFact: UPF0016 protein 5 [Arabidopsis thaliana] sp|Q9SX28.1|GDT15_ARATH RecName: Full=GDT1-like protein 5 gb|AAD49978.1|AC008075_11 Is a member of PF|01169 Uncharacterized (transmembrane domain) protein family [Arabidopsis thaliana] dbj|BAC43336.1| putative tran 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 3.48228e-27
C-terminus
sp_v2.0_unigene64203 SustainPine v2.0 418
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAR24215.1| At1g35180 [Arabidopsis thaliana] gb|AAU05502.1| At3g16870 [Arabidopsis thaliana] gb|AEE31763.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containi 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: transmembrane protein 8.39774e-16
C-terminus
sp_v2.0_unigene77382 SustainPine v2.0 480
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAR24215.1| At1g35180 [Arabidopsis thaliana] gb|AAU05502.1| At3g16870 [Arabidopsis thaliana] gb|AEE31763.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containi 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transmembrane protein 1.4013e-45
Putative C-terminus
sp_v2.0_unigene78877 SustainPine v2.0 652
AutoFact: DUF2053 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transmembrane protein 0.0
N-terminus
sp_v2.0_unigene85757 SustainPine v2.0 392
AutoFact: transmembrane protein, putative [Arabidopsis thaliana] 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain