Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: rna-binding protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene912 SustainPine v2.0 3754
AutoFact: tobacco nucleolin [Nicotiana tabacum] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene1105 SustainPine v2.0 1603
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene3697 SustainPine v2.0 742
AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
C-terminus
sp_v2.0_unigene4383 SustainPine v2.0 967
AutoFact: Ribonucleoprotein, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RAR1_RICCO 5.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
C-terminus
sp_v2.0_unigene13108 SustainPine v2.0 774
AutoFact: RNA binding motif protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ9_CUCME 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
C-terminus
sp_v2.0_unigene15526 SustainPine v2.0 1562
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene16527 SustainPine v2.0 1919
AutoFact: oligouridylate binding protein-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene16812 SustainPine v2.0 2116
AutoFact: Heterogeneous nuclear ribonucleoprotein A3-like protein 2 n=3 Tax=Andropogoneae RepID=B6TV58_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene17289 SustainPine v2.0 2106
AutoFact: putative RNA-binding like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene18182 SustainPine v2.0 2317
AutoFact: protein localized in the nucleoli of pea nuclei; ORF; putative [Pisum sativum] 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 8.16201e-38
Putative Complete
sp_v2.0_unigene20081 SustainPine v2.0 1202
AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
N-terminus
sp_v2.0_unigene20901 SustainPine v2.0 1875
AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Putative Complete
sp_v2.0_unigene21854 SustainPine v2.0 2804
AutoFact: tobacco nucleolin [Nicotiana tabacum] 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 1.68156e-44
Complete
sp_v2.0_unigene22158 SustainPine v2.0 1853
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Internal
sp_v2.0_unigene26170 SustainPine v2.0 2063
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene28907 SustainPine v2.0 1655
AutoFact: putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] dbj|BAD82096.1| putative RRM-containing protein SEB-4 [Oryza sativa Japonica Group] gb|EAY76689.1| hypothetical protein OsI_04643 [Oryza sativa Indica Group] gb|EAZ14353.1| hypothetical p 0.0
FL-Next: sp=Glycine-rich RNA-binding protein 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene53451 SustainPine v2.0 223
AutoFact: RNA-binding protein 42 [Xenopus laevis] sp|A2VDB3.1|RBM42_XENLA RecName: Full=RNA-binding protein 42; AltName: Full=RNA-binding motif protein 42 gb|AAI29698.1| LOC100037209 protein [Xenopus laevis] 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 1.14346e-42
Internal
sp_v2.0_unigene61279 SustainPine v2.0 1208
AutoFact: Putative RRM-containing protein SEB-4 n=3 Tax=Poaceae RepID=Q5N8W4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene80136 SustainPine v2.0 338
AutoFact: Putative RNA-binding protein (Fragment) n=1 Tax=Larix laricina RepID=Q9XEZ5_LARLA 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 4.25404e-08
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain