Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: methyl binding domain protein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3236 SustainPine v2.0 1371
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] sp|Q9LME6.1|MBD8_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 8; Short=AtMBD8; Short=MBD08; AltName: Full=Methyl-CpG-binding protein MBD8 gb|AAF87260.1|AC068562_7 Contains a Methyl-CpG 2.0e-06
FL-Next: sp=Methyl-CpG-binding domain-containing protein 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 3.04398e-14
N-terminus
sp_v2.0_unigene3901 SustainPine v2.0 1238
AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 1.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 7.83685e-20
Putative Complete
sp_v2.0_unigene3921 SustainPine v2.0 1371
AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 3.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 1.7833e-22
Complete
sp_v2.0_unigene6968 SustainPine v2.0 2325
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 0.0
Blast2go: methyl binding domain protein 2.07723e-35
C-terminus
sp_v2.0_unigene7054 SustainPine v2.0 1999
AutoFact: methyl-CPG-binding domain 8 [Arabidopsis thaliana] gb|AAL86338.1| unknown protein [Arabidopsis thaliana] gb|AAM91660.1| unknown protein [Arabidopsis thaliana] gb|AEE30228.1| methyl-CPG-binding domain 8 [Arabidopsis thaliana] 2.0e-21
FL-Next: Isoform 2 of Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 0.0
Blast2go: methyl binding domain protein 8.40779e-45
C-terminus
sp_v2.0_unigene7076 SustainPine v2.0 564
AutoFact: Methyl binding domain protein n=1 Tax=Populus trichocarpa RepID=B9HPH2_POPTR 3.0e-11
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 1.90878e-13
C-terminus
sp_v2.0_unigene14446 SustainPine v2.0 817
AutoFact: Methyl binding domain protein n=1 Tax=Populus trichocarpa RepID=B9HPH2_POPTR 2.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 2.64407e-15
N-terminus
sp_v2.0_unigene16027 SustainPine v2.0 670
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3M7_RICCO 1.0e-08
FL-Next: sp=Methyl-CpG-binding domain-containing protein 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 3.12678e-10
Putative C-terminus
sp_v2.0_unigene17248 SustainPine v2.0 971
AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl binding domain protein 3.71356e-20
N-terminus
sp_v2.0_unigene23036 SustainPine v2.0 346
AutoFact: Methyl-CpG-binding domain-containing protein 5 n=2 Tax=Arabidopsis RepID=MBD5_ARATH 7.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 5.29655e-16
N-terminus
sp_v2.0_unigene43603 SustainPine v2.0 398
AutoFact: putative methyl-binding domain (MBD108) protein [Brachypodium sylvaticum] 1.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 2.02333e-21
Internal
sp_v2.0_unigene59575 SustainPine v2.0 611
AutoFact: Methyl-CpG-binding domain-containing protein 5 n=2 Tax=Arabidopsis RepID=MBD5_ARATH 5.0e-15
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 5.90533e-18
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain