Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: gag-pol polyprotein

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene282 SustainPine v2.0 2299
• AutoFact: pfam00665, rve, Integrase core domain 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Complete
sp_v2.0_unigene7355 SustainPine v2.0 2789
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
N-terminus
sp_v2.0_unigene8067 SustainPine v2.0 1630
• AutoFact: Integrase core domain containing protein n=1 Tax=Asparagus officinalis RepID=Q2AA43_ASPOF 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v2.0_unigene10847 SustainPine v2.0 1112
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative N-terminus
sp_v2.0_unigene12199 SustainPine v2.0 548
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 1.0e-25
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 2.86223e-27
C-terminus
sp_v2.0_unigene14971 SustainPine v2.0 476
• AutoFact: PREDICTED: copia protein-like n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI0001DE983F 2.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 3.8378e-17
Putative N-terminus
sp_v2.0_unigene18064 SustainPine v2.0 386
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 4.0e-23
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 1.6993e-26
C-terminus
sp_v2.0_unigene19481 SustainPine v2.0 588
• AutoFact: Gag-pol polyprotein n=1 Tax=Silene latifolia RepID=E7BQD5_SILLA 5.0e-25
• FL-Next: tr=Gag-pol polyprotein; Silene latifolia (White campion) (Bladder campion). 0.0
• Blast2go: gag-pol polyprotein 5.3152e-28
Internal
sp_v2.0_unigene20004 SustainPine v2.0 203
• AutoFact: Retrotransposon protein, putative, Ty3-gypsy subclass n=16 Tax=Magnoliophyta RepID=Q7XG23_ORYSJ 3.0e-11
• FL-Next: tr=At2g06190; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gag-pol polyprotein 3.09621e-14
Putative N-terminus
sp_v2.0_unigene20052 SustainPine v2.0 275
• AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 2.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 5.71491e-20
Internal
sp_v2.0_unigene20169 SustainPine v2.0 435
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene20501 SustainPine v2.0 317
• AutoFact: F5K24.1 protein n=1 Tax=Arabidopsis thaliana RepID=Q9ZPF9_ARATH 2.0e-16
• FL-Next: tr=F5K24.1 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: gag-pol polyprotein 4.68599e-19
Internal
sp_v2.0_unigene22251 SustainPine v2.0 673
• AutoFact: OSJNBa0017P10.4 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XQ51_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative Complete
sp_v2.0_unigene24416 SustainPine v2.0 890
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 9.0e-21
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 3.50465e-23
C-terminus
sp_v2.0_unigene24572 SustainPine v2.0 351
• AutoFact: Pol polyprotein n=1 Tax=Citrus x paradisi RepID=Q94FM1_CITPA 2.0e-24
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 1.19247e-29
C-terminus
sp_v2.0_unigene24586 SustainPine v2.0 1555
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
N-terminus
sp_v2.0_unigene24623 SustainPine v2.0 996
• AutoFact: Putative integrase n=1 Tax=Oryza sativa Japonica Group RepID=Q75M81_ORYSJ 5.0e-11
• FL-Next: tr=Putative integrase; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: gag-pol polyprotein 2.8581e-11
C-terminus
sp_v2.0_unigene24667 SustainPine v2.0 554
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 1.0e-22
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 3.60639e-26
C-terminus
sp_v2.0_unigene24684 SustainPine v2.0 547
• AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 7.0e-10
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: gag-pol polyprotein 1.98586e-10
N-terminus
sp_v2.0_unigene24697 SustainPine v2.0 882
• AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol polyprotein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain