Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: gag-pol polyprotein

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene83700 SustainPine v2.0 316
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 7.0e-27
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 1.45329e-26
Internal
sp_v2.0_unigene83714 SustainPine v2.0 558
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene83716 SustainPine v2.0 488
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 4.0e-13
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 2.03778e-14
N-terminus
sp_v2.0_unigene83723 SustainPine v2.0 420
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 1.4013e-45
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
sp_v2.0_unigene83732 SustainPine v2.0 348
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 1.0e-12
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 1.42851e-14
Internal
sp_v2.0_unigene83737 SustainPine v2.0 368
AutoFact: Copia-type polyprotein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCE4_CUCME 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 3.28507e-35
Internal
sp_v2.0_unigene83738 SustainPine v2.0 390
AutoFact: Polyprotein-like n=1 Tax=Solanum chilense RepID=Q9AU17_SOLCI 2.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 1.23065e-28
Internal
sp_v2.0_unigene83740 SustainPine v2.0 352
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 5.0e-06
FL-Next: tr=Gag-Pol polyprotein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: gag-pol polyprotein 7.31796e-07
N-terminus
sp_v2.0_unigene83755 SustainPine v2.0 668
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 7.0e-13
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 7.97034e-14
Internal
sp_v2.0_unigene83765 SustainPine v2.0 315
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 9.0e-13
FL-Next: tr=Gag-Pol polyprotein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: gag-pol polyprotein 2.08775e-15
Internal
sp_v2.0_unigene83767 SustainPine v2.0 559
AutoFact: Gag-Pol n=1 Tax=Ipomoea batatas RepID=Q6BCY1_IPOBA 8.0e-15
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 1.67491e-16
N-terminus
sp_v2.0_unigene83785 SustainPine v2.0 504
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 6.0e-10
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: gag-pol polyprotein 5.98213e-11
N-terminus
sp_v2.0_unigene84779 SustainPine v2.0 402
AutoFact: Truncated copia-type polyprotein n=1 Tax=Glycine max RepID=C0JJI1_SOYBN 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: gag-pol polyprotein 1.80394e-20
Internal
sp_v2.0_unigene84876 SustainPine v2.0 448
AutoFact: Unassigned protein
Blast2go: gag-pol polyprotein 6.49913e-08
unknown
sp_v2.0_unigene85039 SustainPine v2.0 507
AutoFact: Metallothionein-like protein EMB30 n=6 Tax=Picea RepID=MT3_PICGL 5.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 1.13959e-07
Complete
sp_v2.0_unigene85603 SustainPine v2.0 550
AutoFact: Gag-pol polyprotein n=2 Tax=Populus RepID=Q710T7_POPDE 1.0e-20
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 2.13829e-23
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain