Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: dna binding

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene893 SustainPine v2.0 2044
AutoFact: duplicated SANT DNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB10001.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59913.1| unknown protein [Arabidopsis thaliana] gb|AAM20221.1| unknown protein [Arabidopsis thaliana] gb|AAS1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene939 SustainPine v2.0 1751
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Y0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
sp_v2.0_unigene1037 SustainPine v2.0 1682
AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene1323 SustainPine v2.0 1391
AutoFact: PHD finger protein-like n=2 Tax=Oryza sativa RepID=Q5N7H9_ORYSJ 7.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 5.45517e-29
Putative Complete
sp_v2.0_unigene1367 SustainPine v2.0 2523
AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene1519 SustainPine v2.0 1949
AutoFact: MYB transcription factor [Hevea brasiliensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative Complete
sp_v2.0_unigene2128 SustainPine v2.0 1527
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 0.0
C-terminus
sp_v2.0_unigene2274 SustainPine v2.0 889
AutoFact: RNA polymerase III RPC4 [Arabidopsis thaliana] emb|CAC05464.1| putative protein [Arabidopsis thaliana] gb|AED91384.1| RNA polymerase III RPC4 [Arabidopsis thaliana] 1.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 1.69445e-41
Putative C-terminus
sp_v2.0_unigene2726 SustainPine v2.0 2237
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna binding 0.0
Putative Complete
sp_v2.0_unigene2839 SustainPine v2.0 2373
AutoFact: pfam03763, Remorin_C, Remorin, C-terminal region 7.9874e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene3335 SustainPine v2.0 2896
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene3614 SustainPine v2.0 1162
AutoFact: putative PHD zinc finger protein [Ipomoea trifida] dbj|BAF36299.1| hypothetical protein [Ipomoea trifida] 0.0
FL-Next: tr=Putative uncharacterized protein At2g37520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene3885 SustainPine v2.0 1860
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
sp_v2.0_unigene4458 SustainPine v2.0 1891
AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-05
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 0.0
Putative Complete
sp_v2.0_unigene4699 SustainPine v2.0 763
AutoFact: Med26 domain containing protein 5.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna binding 6.72884e-33
Internal
sp_v2.0_unigene4748 SustainPine v2.0 1466
AutoFact: protein alfin-like 3 [Arabidopsis thaliana] emb|CAB87196.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAL32929.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAM47893.1| nucleic acid binding protein-like [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene5288 SustainPine v2.0 767
AutoFact: Class III homeodomain-leucine zipper n=2 Tax=Psilotum nudum RepID=Q1WD31_PSINU 9.0e-24
FL-Next: tr=Class III homeodomain-leucine zipper; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Blast2go: dna binding 2.12877e-27
N-terminus
sp_v2.0_unigene5312 SustainPine v2.0 662
AutoFact: Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] gb|AEE76957.1| Helicase/SANT-associated, DNA binding protein [Arabidopsis thaliana] 9.0e-06
FL-Next: tr=Putative uncharacterized protein OJ1120_C08.12; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 3.85409e-17
Internal
sp_v2.0_unigene5641 SustainPine v2.0 963
AutoFact: PTEN_C2 multi-domain protein 6.0e-37
FL-Next: sp=Formin-like protein 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene6022 SustainPine v2.0 1344
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9S006_RICCO 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain