Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: dna binding

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene6734 SustainPine v2.0 1580
AutoFact: AT-hook DNA-binding protein [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene6796 SustainPine v2.0 1594
AutoFact: PHD finger/nucleic acid binding protein [Olimarabidopsis pumila] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene6807 SustainPine v2.0 1385
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9ST76_RICCO 0.0
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 0.0
N-terminus
sp_v2.0_unigene8092 SustainPine v2.0 1023
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene9678 SustainPine v2.0 1500
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9STX4_RICCO 0.0
FL-Next: sp=Myb-related protein 3R-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Putative N-terminus
sp_v2.0_unigene10726 SustainPine v2.0 2023
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDQ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene11590 SustainPine v2.0 475
AutoFact: zf-BED domain containing protein 2.0e-06
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 9.42437e-09
N-terminus
sp_v2.0_unigene12052 SustainPine v2.0 915
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 2.11906e-13
N-terminus
sp_v2.0_unigene12237 SustainPine v2.0 825
AutoFact: ELM2; AT-rich interaction region; Homeodomain-related n=1 Tax=Medicago truncatula RepID=Q2HUC6_MEDTR 4.0e-27
FL-Next: tr=ELM2; AT-rich interaction region; Homeodomain-related; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: dna binding 7.26063e-27
Putative C-terminus
sp_v2.0_unigene12887 SustainPine v2.0 271
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 3.0e-09
FL-Next: tr=DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna binding 6.38945e-11
Internal
sp_v2.0_unigene13217 SustainPine v2.0 1310
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] sp|Q9FMS5.1|MS1_ARATH RecName: Full=PHD finger protein MALE STERILITY 1 dbj|BAB08324.1| unnamed protein product [Arabidopsis thaliana] gb|AED93002.1| RING/FYVE/PHD zinc finger-containing 0.0
FL-Next: sp=PHD finger protein MALE STERILITY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Putative C-terminus
sp_v2.0_unigene13868 SustainPine v2.0 825
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 8.28556e-28
Complete
sp_v2.0_unigene14138 SustainPine v2.0 1854
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Putative Complete
sp_v2.0_unigene14771 SustainPine v2.0 264
AutoFact: ATP/DNA binding protein n=2 Tax=Arabidopsis RepID=Q9M305_ARATH 7.0e-20
FL-Next: tr=ATP/DNA binding protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 4.87468e-20
Internal
sp_v2.0_unigene15167 SustainPine v2.0 1219
AutoFact: PREDICTED: ripening-related bZIP protein-like isoform 2 [Vitis vinifera] ref|XP_002284785.1| PREDICTED: ripening-related bZIP protein-like isoform 1 [Vitis vinifera] emb|CAB85632.1| putative ripening-related bZIP protein [Vitis vinifera] 2.0e-38
FL-Next: sp=ABSCISIC ACID-INSENSITIVE 5-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
N-terminus
sp_v2.0_unigene15272 SustainPine v2.0 1154
AutoFact: DUF659 domain containing protein 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene16154 SustainPine v2.0 719
AutoFact: DUF659 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 0.0
Internal
sp_v2.0_unigene16842 SustainPine v2.0 1813
AutoFact: PHD finger/nucleic acid binding protein [Olimarabidopsis pumila] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
sp_v2.0_unigene19538 SustainPine v2.0 267
AutoFact: zf-BED domain containing protein 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 4.96294e-07
Internal
sp_v2.0_unigene19552 SustainPine v2.0 425
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna binding 3.45145e-40
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain