Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene29763 SustainPine v2.0 1111
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
sp_v2.0_unigene36604 SustainPine v2.0 342
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 6.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.01777e-11
Internal
sp_v2.0_unigene39652 SustainPine v2.0 368
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.01485e-31
Internal
sp_v2.0_unigene41192 SustainPine v2.0 426
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 3.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
sp_v2.0_unigene47490 SustainPine v2.0 385
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 3.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 5.71285e-17
Internal
sp_v2.0_unigene50263 SustainPine v2.0 336
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 2.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrovirus-related pol polyprotein from transposon tnt 1-94 5.70668e-26
Internal
sp_v2.0_unigene66054 SustainPine v2.0 359
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 0.0001
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: hypothetical protein VITISV_021425 [Vitis vinifera] 5.56733e-07
Internal
sp_v2.0_unigene67030 SustainPine v2.0 365
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 2.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 2.01231e-08
Internal
sp_v2.0_unigene69984 SustainPine v2.0 440
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 3.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retroelement pol polyprotein 7.28361e-12
Putative N-terminus
sp_v2.0_unigene73264 SustainPine v2.0 459
• AutoFact: Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana RepID=Q9SHL9_ARATH 3.0e-07
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: retroelement pol polyprotein 6.94977e-07
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain