Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene12233 SustainPine v2.0 1033
AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein chup1 0.0
C-terminus
sp_v2.0_unigene12736 SustainPine v2.0 605
AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein chloroplastic-like 9.09443e-11
Putative N-terminus
sp_v2.0_unigene15156 SustainPine v2.0 1082
AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 8.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein chloroplastic-like 8.30635e-38
N-terminus
sp_v2.0_unigene48486 SustainPine v2.0 265
AutoFact: PREDICTED: similar to CHUP1 (CHLOROPLAST UNUSUAL POSITIONING 1) n=1 Tax=Vitis vinifera RepID=UPI0001982883 1.0e-15
FL-Next: sp=Protein CHUP1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein chup1 1.71004e-15
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain