Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE

Source: Description from AutoFact

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene25153 SustainPine v2.0 894
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 9.0e-14
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: retrotransposon unclassified 1.32692e-13
Internal
sp_v2.0_unigene32077 SustainPine v2.0 864
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 0.0
Putative C-terminus
sp_v2.0_unigene32302 SustainPine v2.0 341
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 8.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty1-copia subclass 3.41527e-26
Internal
sp_v2.0_unigene32960 SustainPine v2.0 775
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.8026e-45
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 0.0
Putative N-terminus
sp_v2.0_unigene34162 SustainPine v2.0 608
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-21
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
• Blast2go: copia-type polyprotein 1.2404e-23
C-terminus
sp_v2.0_unigene36966 SustainPine v2.0 768
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 8.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.49429e-36
Putative N-terminus
sp_v2.0_unigene38621 SustainPine v2.0 356
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-20
• FL-Next: tr=Putative gag-pol polyprotein, identical; Solanum demissum (Wild potato). 0.0
• Blast2go: retrotransposon unclassified 1.67805e-24
Internal
sp_v2.0_unigene41259 SustainPine v2.0 513
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 7.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol identical 6.51086e-25
C-terminus
sp_v2.0_unigene42712 SustainPine v2.0 484
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 4.2039e-45
Internal
sp_v2.0_unigene45457 SustainPine v2.0 412
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol identical 2.47867e-29
Internal
sp_v2.0_unigene45597 SustainPine v2.0 679
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.47575e-36
Internal
sp_v2.0_unigene45744 SustainPine v2.0 504
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-20
• FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: gag-pol identical 3.38266e-24
Putative N-terminus
sp_v2.0_unigene46157 SustainPine v2.0 127
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 9.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia ltr rider 5.19715e-11
Internal
sp_v2.0_unigene47231 SustainPine v2.0 482
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon ty1-copia subclass 9.7991e-32
Internal
sp_v2.0_unigene47948 SustainPine v2.0 360
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 7.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 1.09643e-35
Internal
sp_v2.0_unigene55902 SustainPine v2.0 539
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 3.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
sp_v2.0_unigene63440 SustainPine v2.0 541
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.99993e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: reverse transcriptase 3.50829e-41
Putative N-terminus
sp_v2.0_unigene67612 SustainPine v2.0 354
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
sp_v2.0_unigene68182 SustainPine v2.0 381
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 4.18805e-33
Internal
sp_v2.0_unigene69370 SustainPine v2.0 304
• AutoFact: Putative gag-pol polyprotein, identical n=1 Tax=Solanum demissum RepID=Q6L3N8_SOLDE 1.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: copia-type polyprotein 2.60333e-23
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain