Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: [R] COG0724 RNA-binding proteins (RRM domain)

Source: Description from AutoFact


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2789 SustainPine v2.0 1242
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
sp_v2.0_unigene3167 SustainPine v2.0 1900
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 11 protein 0.0
Complete
sp_v2.0_unigene4396 SustainPine v2.0 1379
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene7035 SustainPine v2.0 1513
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna and export factor binding 0.0
Complete
sp_v2.0_unigene10664 SustainPine v2.0 2419
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 4.0e-07
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
sp_v2.0_unigene21517 SustainPine v2.0 1193
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 7.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: spliceosomal protein 0.0
Complete
sp_v2.0_unigene23376 SustainPine v2.0 1242
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene25563 SustainPine v2.0 949
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
FL-Next: sp=Glycine-rich RNA-binding protein; Daucus carota (Carrot). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase e 0.0
Complete
sp_v2.0_unigene26860 SustainPine v2.0 2992
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 1.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tho complex subunit 0.0
Putative Complete
sp_v2.0_unigene27987 SustainPine v2.0 1767
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 4.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene28625 SustainPine v2.0 1117
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
FL-Next: sp=Glycine-rich RNA-binding protein; Daucus carota (Carrot). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase e 0.0
Complete
sp_v2.0_unigene31961 SustainPine v2.0 508
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 8.3096e-37
Internal
sp_v2.0_unigene63537 SustainPine v2.0 1180
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene65006 SustainPine v2.0 342
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 5.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 8.03753e-21
Putative N-terminus
sp_v2.0_unigene85708 SustainPine v2.0 782
AutoFact: [R] COG0724 RNA-binding proteins (RRM domain) 2.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tho complex subunit 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain