Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: condensed nuclear chromosome

Term: GO:0000794  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene27918 SustainPine v2.0 381
AutoFact: Auxin-resistance protein 6 (Fragment) n=2 Tax=Arabidopsis thaliana RepID=A5YXU7_ARATH 4.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin-resistance protein 6 0.0
Internal
sp_v2.0_unigene29943 SustainPine v2.0 492
AutoFact: MutS-like protein 5 [Arabidopsis thaliana] 3.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna mismatch repair protein 3.91659e-23
C-terminus
sp_v2.0_unigene36726 SustainPine v2.0 530
AutoFact: crossover junction endonuclease MUS81 [Arabidopsis thaliana] dbj|BAD66696.1| endonuclease [Arabidopsis thaliana] gb|AEE85822.1| crossover junction endonuclease MUS81 [Arabidopsis thaliana] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: crossover junction endonuclease mus81 4.67264e-40
Internal
sp_v2.0_unigene47168 SustainPine v2.0 337
AutoFact: endonuclease [Arabidopsis thaliana] 6.0e-23
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: crossover junction endonuclease mus81-like 4.55121e-28
Internal
sp_v2.0_unigene48404 SustainPine v2.0 378
AutoFact: Similarity to mismatch repair protein MutS n=1 Tax=Arabidopsis thaliana RepID=Q9LTP4_ARATH 2.0e-33
FL-Next: tr=At3g20475; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: muts protein homolog 5-like 1.64908e-40
Putative N-terminus
sp_v2.0_unigene56256 SustainPine v2.0 518
AutoFact: endonuclease [Arabidopsis thaliana] 1.0e-15
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: crossover junction endonuclease mus81 2.78726e-19
Internal
sp_v2.0_unigene85714 SustainPine v2.0 431
AutoFact: histone-lysine N-methyltransferase SUV39H1-A [Danio rerio] gb|AAH76417.1| Suppressor of variegation 3-9 homolog 1a [Danio rerio] 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase suv39h1 2.06791e-26
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain