Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA-directed RNA polymerase V complex

Term: GO:0000419  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene26759 SustainPine v2.0 673
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 3.0e-36
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: nuclear rna polymerase d2a 1.27412e-40
Internal
sp_v2.0_unigene31847 SustainPine v2.0 434
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO 3.0e-25
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-directed rna 8.46086e-29
N-terminus
sp_v2.0_unigene34188 SustainPine v2.0 658
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase iv second largest subunit 0.0
Complete
sp_v2.0_unigene36681 SustainPine v2.0 546
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO 2.0e-22
FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: the plant-specific rna polymerase iv largest subunit-like protein 3.12698e-22
Internal
sp_v2.0_unigene39714 SustainPine v2.0 334
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum lycopersicum RepID=Q1L6V6_SOLLC 3.0e-27
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: nuclear rna polymerase d2a 1.18154e-31
Internal
sp_v2.0_unigene39785 SustainPine v2.0 496
AutoFact: DNA-directed RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9GM06_POPTR 2.0e-39
FL-Next: sp=DNA-directed RNA polymerase; Pinus monophylla. Plastid; Chloroplast. 0.0
Blast2go: rna polymerase iv subunit 5.60519e-45
Internal
sp_v2.0_unigene42407 SustainPine v2.0 402
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: dna-directed rna polymerase d subunit 2a-like 0.0
Internal
sp_v2.0_unigene70212 SustainPine v2.0 473
AutoFact: DNA-directed RNA polymerase (Fragment) n=2 Tax=Vitis vinifera RepID=D7UBN7_VITVI 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dcl 9.9569e-19
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain