Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chromatin remodeling

Term: GO:0006338  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene477 SustainPine v2.0 1651
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SUQ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: global transcription factor group 0.0
N-terminus
sp_v2.0_unigene4610 SustainPine v2.0 1868
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Putative C-terminus
sp_v2.0_unigene4902 SustainPine v2.0 2201
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TE60_VITVI 5.99756e-43
FL-Next: sp=DNA topoisomerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna topoisomerase 1 1.4013e-45
N-terminus
sp_v2.0_unigene5015 SustainPine v2.0 737
AutoFact: Predicted protein n=2 Tax=Hordeum vulgare RepID=F2E947_HORVD 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gaga-binding transcriptional activator 0.0
C-terminus
sp_v2.0_unigene6405 SustainPine v2.0 1274
AutoFact: Myb n=1 Tax=Nicotiana tabacum RepID=Q948S5_TOBAC 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB9; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: v-myb myeloblastosis viral oncogene homologue 0.0
N-terminus
sp_v2.0_unigene7514 SustainPine v2.0 1485
AutoFact: SNF5 homolog BSH [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin structure-remodeling complex protein bsh 0.0
Complete
sp_v2.0_unigene20381 SustainPine v2.0 858
AutoFact: Actin related protein n=1 Tax=Populus trichocarpa RepID=B9IMW6_POPTR 2.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 6 2.8125e-36
C-terminus
sp_v2.0_unigene26306 SustainPine v2.0 374
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: long-chain-fatty-acid-- ligase 3 5.03865e-17
C-terminus
sp_v2.0_unigene29580 SustainPine v2.0 959
AutoFact: actin-related protein 6 [Olimarabidopsis pumila] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 6 0.0
N-terminus
sp_v2.0_unigene31079 SustainPine v2.0 277
AutoFact: putative actin protein [Arabidopsis thaliana] 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 6 3.74921e-31
Putative N-terminus
sp_v2.0_unigene33795 SustainPine v2.0 669
AutoFact: Actin related protein n=1 Tax=Populus trichocarpa RepID=B9IMW6_POPTR 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 6 3.17408e-36
C-terminus
sp_v2.0_unigene61565 SustainPine v2.0 668
AutoFact: RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I gb|AAB41401.1| topoisomerase I [Daucus carota] 1.0e-39
FL-Next: sp=DNA topoisomerase 1; Daucus carota (Carrot). 0.0
Blast2go: dna topoisomerase i 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain