Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: negative regulation of transcription from RNA polymerase II promoter

Term: GO:0000122  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4405 SustainPine v2.0 245
AutoFact: PREDICTED: catenin (cadherin-associated protein), beta 1, 88kDa isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1FC25 4.0e-29
Blast2go: catenin beta-1 4.68707e-39
Putative coding
sp_v2.0_unigene6405 SustainPine v2.0 1274
AutoFact: Myb n=1 Tax=Nicotiana tabacum RepID=Q948S5_TOBAC 0.0
FL-Next: tr=R2R3-MYB transcription factor MYB9; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: v-myb myeloblastosis viral oncogene homologue 0.0
N-terminus
sp_v2.0_unigene26306 SustainPine v2.0 374
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: long-chain-fatty-acid-- ligase 3 5.03865e-17
C-terminus
sp_v2.0_unigene39483 SustainPine v2.0 235
AutoFact: Met proto-oncogene n=1 Tax=Cavia porcellus RepID=Q07E11_CAVPO 7.0e-21
Blast2go: hepatocyte growth factor receptor- partial 4.0782e-28
unknown
sp_v2.0_unigene40390 SustainPine v2.0 415
AutoFact: PREDICTED: sirtuin 1-like n=1 Tax=Saccoglossus kowalevskii RepID=UPI0001CBC1AC 0.0
FL-Next: tr=Similar to sirtuin; Ectocarpus siliculosus (Brown alga). 0.0
Blast2go: nad-dependent deacetylase sirtuin-1 0.0
Internal
sp_v2.0_unigene43121 SustainPine v2.0 245
AutoFact: PREDICTED: hepatocyte growth factor receptor-like n=1 Tax=Anolis carolinensis RepID=UPI00020395C3 2.0e-13
Blast2go: hepatocyte growth factor receptor 8.21956e-18
unknown
sp_v2.0_unigene80193 SustainPine v2.0 569
AutoFact: PREDICTED: 40S ribosomal protein S14-like n=1 Tax=Nomascus leucogenys RepID=UPI00020AD71F 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein s14 1.03528e-41
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain