Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: chiasma assembly

Term: GO:0051026  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4087 SustainPine v2.0 1369
AutoFact: Tbp-1 interacting protein, putative n=1 Tax=Ricinus communis RepID=B9ST09_RICCO 0.0
FL-Next: sp=Homologous-pairing protein 2 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: homologous-pairing protein 2 homolog 0.0
Complete
sp_v2.0_unigene4507 SustainPine v2.0 1384
AutoFact: Replication factor A 1, rfa1, putative n=1 Tax=Ricinus communis RepID=B9RK18_RICCO 0.0
FL-Next: tr=Replication factor A 1, rfa1, putative; Ricinus communis (Castor bean). 0.0
Blast2go: replication factor a1 0.0
C-terminus
sp_v2.0_unigene20055 SustainPine v2.0 693
AutoFact: replication factor A1 [Arabidopsis thaliana] gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana] dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana] gb|AAO64881.1| At2g06510 [Arabidopsis thaliana] gb|AEC06010.1| replic 7.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 2.11561e-32
N-terminus
sp_v2.0_unigene27864 SustainPine v2.0 2475
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a1 0.0
Complete
sp_v2.0_unigene27923 SustainPine v2.0 1949
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a1 0.0
Complete
sp_v2.0_unigene29943 SustainPine v2.0 492
AutoFact: MutS-like protein 5 [Arabidopsis thaliana] 3.0e-13
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna mismatch repair protein 3.91659e-23
C-terminus
sp_v2.0_unigene32967 SustainPine v2.0 514
AutoFact: Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HB40_POPTR 2.0e-10
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: multipolar spindle 1 1.21488e-11
C-terminus
sp_v2.0_unigene36726 SustainPine v2.0 530
AutoFact: crossover junction endonuclease MUS81 [Arabidopsis thaliana] dbj|BAD66696.1| endonuclease [Arabidopsis thaliana] gb|AEE85822.1| crossover junction endonuclease MUS81 [Arabidopsis thaliana] 2.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: crossover junction endonuclease mus81 4.67264e-40
Internal
sp_v2.0_unigene37090 SustainPine v2.0 721
AutoFact: meiotic recombination protein SPO11-2 [Arabidopsis thaliana] sp|Q9M4A1.1|SPO12_ARATH RecName: Full=Meiotic recombination protein SPO11-2; Short=AtSPO11-2 emb|CAB81545.1| putative topoisomerase VIA [Arabidopsis thaliana] gb|ABE65738.1| DNA topoisomerase VI 0.0
FL-Next: sp=Meiotic recombination protein SPO11-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: meiotic recombination protein spo11-2 0.0
N-terminus
sp_v2.0_unigene41116 SustainPine v2.0 652
AutoFact: Os08g0156900 protein n=4 Tax=Oryza sativa RepID=Q6ZD95_ORYSJ 0.0
FL-Next: sp=Meiotic recombination protein SPO11-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: meiotic recombination protein spo11-2 0.0
C-terminus
sp_v2.0_unigene47168 SustainPine v2.0 337
AutoFact: endonuclease [Arabidopsis thaliana] 6.0e-23
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: crossover junction endonuclease mus81-like 4.55121e-28
Internal
sp_v2.0_unigene48404 SustainPine v2.0 378
AutoFact: Similarity to mismatch repair protein MutS n=1 Tax=Arabidopsis thaliana RepID=Q9LTP4_ARATH 2.0e-33
FL-Next: tr=At3g20475; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: muts protein homolog 5-like 1.64908e-40
Putative N-terminus
sp_v2.0_unigene56256 SustainPine v2.0 518
AutoFact: endonuclease [Arabidopsis thaliana] 1.0e-15
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: crossover junction endonuclease mus81 2.78726e-19
Internal
sp_v2.0_unigene62188 SustainPine v2.0 425
AutoFact: replication factor A1 [Arabidopsis thaliana] gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana] dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana] gb|AAO64881.1| At2g06510 [Arabidopsis thaliana] gb|AEC06010.1| replic 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit 2.3976e-26
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain