Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: RNA interference

Term: GO:0016246  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene38 SustainPine v2.0 3132
AutoFact: AGO1-2 (Fragment) n=1 Tax=Nicotiana benthamiana RepID=Q2LFC3_NICBE 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein argonaute 0.0
Complete
sp_v2.0_unigene26450 SustainPine v2.0 854
AutoFact: Nonsense-mediated mRNA decay protein, putative n=2 Tax=Malpighiales RepID=B9SS25_RICCO 2.0e-36
FL-Next: sp=Regulator of nonsense transcripts 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: regulator of nonsense transcripts 1 homolog 2.71858e-40
C-terminus
sp_v2.0_unigene28874 SustainPine v2.0 563
AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9SJV6_RICCO 3.0e-38
FL-Next: sp=Protein argonaute 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein argonaute 1.12104e-44
Internal
sp_v2.0_unigene37079 SustainPine v2.0 382
AutoFact: DNA-directed RNA polymerase n=4 Tax=Oryza sativa RepID=B9G500_ORYSJ 8.0e-19
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear rna polymerase d1a 1.55727e-21
Internal
sp_v2.0_unigene56473 SustainPine v2.0 452
AutoFact: Eukaryotic translation initiation factor 2c, putative n=1 Tax=Ricinus communis RepID=B9SJV6_RICCO 2.0e-38
FL-Next: sp=Protein argonaute 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein argonaute 3.22299e-44
Internal
sp_v2.0_unigene64933 SustainPine v2.0 544
AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RC12_RICCO 2.0e-23
FL-Next: sp=DNA-directed RNA polymerase D subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear rna polymerase d1a 2.40036e-26
Internal
sp_v2.0_unigene67950 SustainPine v2.0 450
AutoFact: Protein argonaute 1A n=3 Tax=Oryza sativa RepID=AGO1A_ORYSJ 0.0
FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein argonaute 0.0
Internal
sp_v2.0_unigene76735 SustainPine v2.0 342
AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IEP4_POPTR 2.0e-09
FL-Next: sp=RNA-dependent RNA polymerase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna-dependent rna polymerase 2 1.16796e-13
Internal
sp_v2.0_unigene85850 SustainPine v2.0 897
AutoFact: putative type 1 RNA helicase [Oryza sativa Japonica Group] gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of nonsense transcripts 1 homolog 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain