Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: spliceosomal complex

Term: GO:0005681  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2887 SustainPine v2.0 924
AutoFact: mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] gb|AAS49089.1| At3g24730 [Arabidopsis thaliana] gb|AEE76940.1| mRNA splicing factor, thioredoxin-like U5 snRNP [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: thioredoxin-like protein 4b 0.0
Complete
sp_v2.0_unigene3213 SustainPine v2.0 1388
AutoFact: putative splicing factor Prp8 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-mrna-processing-splicing factor 0.0
Internal
sp_v2.0_unigene4617 SustainPine v2.0 1743
AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like 0.0
Putative Complete
sp_v2.0_unigene4901 SustainPine v2.0 1422
AutoFact: splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp31-like 0.0
Putative C-terminus
sp_v2.0_unigene5015 SustainPine v2.0 737
AutoFact: Predicted protein n=2 Tax=Hordeum vulgare RepID=F2E947_HORVD 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gaga-binding transcriptional activator 0.0
C-terminus
sp_v2.0_unigene6108 SustainPine v2.0 2822
AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-processing-splicing factor 8-like 0.0
Complete
sp_v2.0_unigene6136 SustainPine v2.0 1096
AutoFact: Potassium channel regulatory factor, putative n=1 Tax=Ricinus communis RepID=B9S407_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-mrna-splicing factor 18-like 0.0
N-terminus
sp_v2.0_unigene6272 SustainPine v2.0 1880
AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
Putative Complete
sp_v2.0_unigene84994 SustainPine v2.0 838
AutoFact: arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana] sp|P92964.2|RSP31_ARATH RecName: Full=Arginine/serine-rich-splicing factor RSP31 gb|AAL27502.1|AF439831_1 AT3g61860/F21F14_30 [Arabidopsis thaliana] gb|AAM78075.1| AT3g61860/F21F14_30 [Arab 0.0
FL-Next: sp=Arginine/serine-rich-splicing factor RSP31; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: arginine serine-rich-splicing factor rsp31-like 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain