Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: Group II intron splicing

Term: GO:0000373  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene446 SustainPine v2.0 1364
AutoFact: APO protein 1 [Arabidopsis thaliana] gb|AEE34293.1| APO protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apo protein 1 0.0
C-terminus
sp_v2.0_unigene2426 SustainPine v2.0 1115
AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 0.0
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chloroplastic group iia intron splicing facilitator crs1 0.0
C-terminus
sp_v2.0_unigene6096 SustainPine v2.0 455
AutoFact: CRS1_YhbY domain containing protein 3.0e-12
FL-Next: sp=CRS2-associated factor 1, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: crs2-associated factor 1 1.7572e-31
C-terminus
sp_v2.0_unigene17155 SustainPine v2.0 2677
AutoFact: RecName: Full=DEAD-box ATP-dependent RNA helicase 9 0.0
FL-Next: sp=DEAD-box ATP-dependent RNA helicase 53; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dead-box atp-dependent rna helicase 53-like 0.0
Complete
sp_v2.0_unigene35016 SustainPine v2.0 293
AutoFact: Translation factor sui1, putative n=1 Tax=Ricinus communis RepID=B9RA65_RICCO 5.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apo protein 3 1.39212e-16
Internal
sp_v2.0_unigene37565 SustainPine v2.0 560
AutoFact: CRM family member 3A [Arabidopsis thaliana] gb|AEE76712.1| CRM family member 3A [Arabidopsis thaliana] 1.0e-39
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
Blast2go: chloroplastic group iia intron splicing facilitator crs1 0.0
Internal
sp_v2.0_unigene37945 SustainPine v2.0 433
AutoFact: CRM family member 2 [Arabidopsis thaliana] gb|AAM97013.1| unknown protein [Arabidopsis thaliana] gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana] gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana] 2.00386e-43
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Zea mays (Maize). 0.0
Blast2go: chloroplastic group iia intron splicing facilitator chloroplastic-like 0.0
Internal
sp_v2.0_unigene39635 SustainPine v2.0 241
AutoFact: CRS2-associated factor 1 [Arabidopsis thaliana] sp|Q9SL79.2|CAF1P_ARATH RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAK76556.1| unkn 4.0e-25
FL-Next: sp=CRS2-associated factor 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: crs2-associated factor 1 1.06168e-31
Internal
sp_v2.0_unigene41217 SustainPine v2.0 242
AutoFact: CRS2-associated factor 1, chloroplastic precursor [Zea mays] sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAP 4.0e-26
FL-Next: sp=CRS2-associated factor 1, chloroplastic; Zea mays (Maize). 0.0
Blast2go: crs2-associated factor 1 9.21957e-31
Internal
sp_v2.0_unigene48814 SustainPine v2.0 162
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TBI7_VITVI 1.0e-18
FL-Next: sp=CRS2-associated factor 1, chloroplastic; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: crs2-associated factor 1 6.91071e-23
Internal
sp_v2.0_unigene55292 SustainPine v2.0 294
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9XIL5.3|PP154_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15820 pir||G84533 hypothetical protein At2g15820 [imported] - Arabidopsis thaliana gb|AEC06439.1| pent 2.0e-19
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g15820; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 5.21614e-30
Internal
sp_v2.0_unigene57820 SustainPine v2.0 409
AutoFact: CRM family member 3 n=2 Tax=Andropogoneae RepID=A7XN92_MAIZE 7.0e-12
FL-Next: tr=CRM family member 3; Zea mays (Maize). 0.0
Blast2go: chloroplastic group iia intron splicing facilitator chloroplastic-like 5.93263e-15
Internal
sp_v2.0_unigene58385 SustainPine v2.0 314
AutoFact: CRS2-associated factor 2, chloroplastic n=2 Tax=Arabidopsis RepID=CAF2P_ARATH 3.0e-39
FL-Next: sp=CRS2-associated factor 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: crs2-associated factor 2 0.0
Internal
sp_v2.0_unigene59331 SustainPine v2.0 263
AutoFact: CRS2-associated factor 2 [Arabidopsis thaliana] sp|Q9LDA9.1|CAF2P_ARATH RecName: Full=CRS2-associated factor 2, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 2; Flags: Precursor gb|AAF79596.1|AC007 4.0e-17
FL-Next: sp=CRS2-associated factor 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: crs2-associated factor chloroplastic-like 5.47934e-23
Internal
sp_v2.0_unigene62065 SustainPine v2.0 546
AutoFact: CRM family member 2 [Arabidopsis thaliana] gb|AAM97013.1| unknown protein [Arabidopsis thaliana] gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana] gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana] 3.0e-36
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: chloroplastic group iia intron splicing facilitator chloroplastic-like 1.53877e-41
Internal
sp_v2.0_unigene69053 SustainPine v2.0 488
AutoFact: CRM family member 3 [Zea mays] gb|ABU96081.1| CRM family member 3 [Zea mays] 1.0e-25
FL-Next: sp=Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chloroplastic group iia intron splicing facilitator chloroplastic-like 8.1428e-31
Internal
sp_v2.0_unigene70980 SustainPine v2.0 159
AutoFact: CRS2-associated factor 1, chloroplastic n=3 Tax=Andropogoneae RepID=CAF1P_MAIZE 1.0e-18
FL-Next: sp=CRS2-associated factor 1, chloroplastic; Zea mays (Maize). 0.0
Blast2go: crs2-associated factor 1 1.38833e-22
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain