Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: posttranscriptional gene silencing

Term: GO:0016441  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1881 SustainPine v2.0 1980
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Malpighiales RepID=B9IEX4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v2.0_unigene5952 SustainPine v2.0 382
AutoFact: [L] COG4581 Superfamily II RNA helicase 1.0e-08
FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Internal
sp_v2.0_unigene7795 SustainPine v2.0 3078
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 0.0
FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosyl-l-homocysteine hydrolase 0.0
Complete
sp_v2.0_unigene23902 SustainPine v2.0 1878
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 0.0
FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosyl-l-homocysteine hydrolase 0.0
Putative N-terminus
sp_v2.0_unigene25873 SustainPine v2.0 1969
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 0.0
FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosyl-l-homocysteine hydrolase 0.0
Complete
sp_v2.0_unigene27170 SustainPine v2.0 1996
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 0.0
FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosyl-l-homocysteine hydrolase 0.0
Complete
sp_v2.0_unigene34269 SustainPine v2.0 392
AutoFact: histone deacetylase 6 [Arabidopsis thaliana] sp|Q9FML2.1|HDA6_ARATH RecName: Full=Histone deacetylase 6 dbj|BAB10553.1| histone deacetylase [Arabidopsis thaliana] gb|AAL60022.1| putative histone deacetylase [Arabidopsis thaliana] gb|AAM65853.1| histone de 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 2.50526e-22
Putative Complete
sp_v2.0_unigene39049 SustainPine v2.0 214
AutoFact: [L] COG4581 Superfamily II RNA helicase 3.0e-11
FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 9.83692e-26
Internal
sp_v2.0_unigene41617 SustainPine v2.0 507
AutoFact: DEAD-box ATP-dependent RNA helicase ISE2 [Arabidopsis thaliana] sp|B9DFG3.2|ISE2_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 25; AltName: Full=Protein INCREASED SIZE EXCLUSION LIMIT 2 8.40779e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase chloroplastic-like 0.0
Putative N-terminus
sp_v2.0_unigene51463 SustainPine v2.0 254
AutoFact: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic n=2 Tax=Arabidopsis RepID=ISE2_ARATH 8.0e-06
FL-Next: sp=DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dead-box atp-dependent rna helicase ise2 4.27384e-07
Internal
sp_v2.0_unigene80490 SustainPine v2.0 1035
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 0.0
FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adenosylhomocysteinase s-adenosyl-l-homocysteine hydrolase 0.0
C-terminus
sp_v2.0_unigene82477 SustainPine v2.0 577
AutoFact: Adenosylhomocysteinase n=6 Tax=Tracheophyta RepID=A9NUB8_PICSI 0.0
FL-Next: sp=Adenosylhomocysteinase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosyl-l-homocysteine hydrolase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain