Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production

Source: Description from Blast2go


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene1803 SustainPine v2.0 2905
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Putative Complete
sp_v2.0_unigene5715 SustainPine v2.0 1657
AutoFact: 1(10),5-germacradien-4-ol synthase n=1 Tax=Pinus sylvestris RepID=B4XAK5_PINSY 0.0
FL-Next: tr=1(10),5-germacradien-4-ol synthase; Pinus sylvestris (Scots pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene5823 SustainPine v2.0 1457
AutoFact: Alpha-bisabolene synthase n=1 Tax=Abies grandis RepID=TPSD1_ABIGR 0.0
FL-Next: sp=Alpha-bisabolene synthase; Abies grandis (Grand fir). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene6217 SustainPine v2.0 288
AutoFact: E-alpha-bisabolene synthase n=1 Tax=Picea abies RepID=Q675L6_PICAB 1.0e-20
FL-Next: tr=(E)-beta-farnesene synthase 2; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 2.61435e-21
Internal
sp_v2.0_unigene6490 SustainPine v2.0 2369
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: tr=Levopimaradiene/abietadiene synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Putative C-terminus
sp_v2.0_unigene6549 SustainPine v2.0 1947
AutoFact: Alpha-bisabolene synthase n=1 Tax=Abies grandis RepID=TPSD1_ABIGR 0.0
FL-Next: sp=Alpha-bisabolene synthase; Abies grandis (Grand fir). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene7446 SustainPine v2.0 2868
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: sp=Isopimaradiene synthase, chloroplastic; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Complete
sp_v2.0_unigene9682 SustainPine v2.0 703
AutoFact: Alpha-bisabolene synthase n=1 Tax=Abies grandis RepID=TPSD1_ABIGR 0.0
FL-Next: sp=Alpha-bisabolene synthase; Abies grandis (Grand fir). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Putative N-terminus
sp_v2.0_unigene14770 SustainPine v2.0 675
AutoFact: E-beta farnesene synthase n=1 Tax=Pinus sylvestris RepID=D7PCH9_PINSY 0.0
FL-Next: tr=E-beta farnesene synthase; Pinus sylvestris (Scots pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Internal
sp_v2.0_unigene18673 SustainPine v2.0 543
AutoFact: Abietadiene synthase, chloroplastic n=1 Tax=Abies grandis RepID=TPSDV_ABIGR 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Internal
sp_v2.0_unigene21274 SustainPine v2.0 2436
AutoFact: Abietadiene synthase, chloroplastic n=1 Tax=Abies grandis RepID=TPSDV_ABIGR 0.0
FL-Next: tr=Levopimaradiene/abietadiene synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene27562 SustainPine v2.0 2032
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: sp=Levopimaradiene synthase, chloroplastic; Pinus taeda (Loblolly pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene27928 SustainPine v2.0 1263
AutoFact: 1(10),5-germacradien-4-ol synthase n=1 Tax=Pinus sylvestris RepID=B4XAK5_PINSY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene28478 SustainPine v2.0 1314
AutoFact: E-beta farnesene synthase n=1 Tax=Pinus sylvestris RepID=D7PCH9_PINSY 0.0
FL-Next: tr=E-beta farnesene synthase; Pinus sylvestris (Scots pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene29048 SustainPine v2.0 2114
AutoFact: Alpha-humulene synthase n=2 Tax=Picea RepID=F2XF97_PICGL 0.0
FL-Next: tr=Delta-selinene-like synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Complete
sp_v2.0_unigene29374 SustainPine v2.0 1194
AutoFact: Isopimaradiene synthase, chloroplastic n=6 Tax=Picea RepID=TPSD2_PICAB 0.0
FL-Next: tr=Levopimaradiene/abietadiene synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene30552 SustainPine v2.0 290
AutoFact: Alpha-bisabolene synthase n=1 Tax=Abies grandis RepID=TPSD1_ABIGR 1.0e-08
FL-Next: sp=Alpha-bisabolene synthase; Abies grandis (Grand fir). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 3.80201e-10
C-terminus
sp_v2.0_unigene30685 SustainPine v2.0 554
AutoFact: E-beta farnesene synthase n=1 Tax=Pinus sylvestris RepID=D7PCH9_PINSY 0.0
FL-Next: tr=E-beta farnesene synthase; Pinus sylvestris (Scots pine). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
Internal
sp_v2.0_unigene31935 SustainPine v2.0 991
AutoFact: Levopimaradiene synthase, chloroplastic n=2 Tax=Pinus RepID=TPSD1_PINTA 0.0
FL-Next: tr=Levopimaradiene/abietadiene synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus
sp_v2.0_unigene32791 SustainPine v2.0 871
AutoFact: Alpha-humulene synthase n=2 Tax=Picea RepID=F2XF97_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: a chain structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain