Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: tRNA splicing, via endonucleolytic cleavage and ligation

Term: GO:0006388  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2307 SustainPine v2.0 1238
AutoFact: putative tRNA 2'phosphotransferase [Arabidopsis thaliana] gb|AEC10539.1| putative tRNA 2'phosphotransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna 2 phosphotransferase 0.0
C-terminus
sp_v2.0_unigene4816 SustainPine v2.0 656
AutoFact: tRNA intron endonuclease, catalytic C-terminal [Medicago truncatula] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna-splicing endonuclease subunit sen2-1 8.40779e-45
N-terminus
sp_v2.0_unigene5868 SustainPine v2.0 2192
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Complete
sp_v2.0_unigene6772 SustainPine v2.0 1109
AutoFact: tRNA intron endonuclease [Arabidopsis thaliana] dbj|BAA88628.1| tRNA intron endonuclease [Arabidopsis thaliana] 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna intron endonuclease 0.0
C-terminus
sp_v2.0_unigene13861 SustainPine v2.0 1628
AutoFact: putative tRNA 2'phosphotransferase [Arabidopsis thaliana] gb|AEC10539.1| putative tRNA 2'phosphotransferase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna 2 phosphotransferase 0.0
Putative Complete
sp_v2.0_unigene30270 SustainPine v2.0 594
AutoFact: WS0274.B21_I24 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0274_I24 5, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: translation elongation factor ef-1 alpha 0.0
C-terminus
sp_v2.0_unigene33302 SustainPine v2.0 648
AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: rna ligase 0.0
Internal
sp_v2.0_unigene35768 SustainPine v2.0 781
AutoFact: RNA ligase isoform 1 [Triticum aestivum] 0.0
FL-Next: tr=Translation elongation factor EF-1 alpha; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna ligase 0.0
Internal
sp_v2.0_unigene42696 SustainPine v2.0 484
AutoFact: RNA ligase [Arabidopsis thaliana] ref|NP_001154320.1| RNA ligase [Arabidopsis thaliana] dbj|BAF02126.1| translation elongation factor EF-1 alpha [Arabidopsis thaliana] gb|AEE28210.1| RNA ligase [Arabidopsis thaliana] gb|AEE28211.1| RNA ligase [Arabidopsis 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: rna ligase isoform 1.12104e-44
Internal
sp_v2.0_unigene78103 SustainPine v2.0 284
AutoFact: WS0274.B21_I24 SS-IL-A-FL-14 Picea sitchensis cDNA clone WS0274_I24 5, mRNA sequence. 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: translation elongation factor ef-1 alpha 2.06898e-18
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain