Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: SustainPine v2.0

Name: plastid organization

Term: GO:0009657  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
sp_v2.0_unigene137 SustainPine v2.0 1762
• AutoFact: photosystem II stability/assembly factor HCF136 [Arabidopsis thaliana] sp|O82660.1|P2SAF_ARATH RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic; Flags: Precursor emb|CAA75723.1| HCF136 protein [Arabidopsis thaliana] dbj|BAB0982 0.0
• FL-Next: sp=Photosystem II stability/assembly factor HCF136, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Complete
sp_v2.0_unigene14960 SustainPine v2.0 736
• AutoFact: putative translation releasing factor 2 [Cucumis sativus] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: high chlorophyll fluorescent 109 protein 0.0
N-terminus
sp_v2.0_unigene16095 SustainPine v2.0 1587
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid protein 0.0
Complete
sp_v2.0_unigene16179 SustainPine v2.0 1366
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid protein 0.0
Putative Complete
sp_v2.0_unigene18735 SustainPine v2.0 1741
• AutoFact: Alternative oxidase n=1 Tax=Picea sitchensis RepID=A9NQ56_PICSI 0.0
• FL-Next: sp=Alternative oxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: immutans protein 0.0
Complete
sp_v2.0_unigene19066 SustainPine v2.0 649
• AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 0.0
• FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: abscisic acid-insensitive protein 3 0.0
Internal
sp_v2.0_unigene24037 SustainPine v2.0 1015
• AutoFact: putative thioredoxin [Solanum lycopersicum] 2.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 5.46815e-33
Complete
sp_v2.0_unigene27731 SustainPine v2.0 2648
• AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAH20174.1| AT5G10490 [Arabidopsis thaliana] gb|AED91552.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: mscs-like 2 protein 0.0
Putative Complete
sp_v2.0_unigene29338 SustainPine v2.0 1448
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid protein 0.0
Putative Complete
sp_v2.0_unigene33942 SustainPine v2.0 937
• AutoFact: high chlorophyll fluorescent 109 protein [Arabidopsis thaliana] dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana] gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana] gb|AAM51328.1| putative translation r 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: peptide chain release factor 2 0.0
C-terminus
sp_v2.0_unigene35583 SustainPine v2.0 429
• AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAD94053.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01838.1| hypothetical protein [Arabidopsis thaliana] gb|AED91551.1| MSCS-like 2 protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: mscs-like 2 protein 0.0
Internal
sp_v2.0_unigene46936 SustainPine v2.0 341
• AutoFact: protein high chlorophyll fluorescent 107 [Arabidopsis thaliana] gb|AAM13111.1| unknown protein [Arabidopsis thaliana] gb|AAP37764.1| At3g17040 [Arabidopsis thaliana] gb|AEE75897.1| protein high chlorophyll fluorescent 107 [Arabidopsis thaliana] 7.0e-15
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein high chlorophyll fluorescent 107 1.66751e-19
Internal
sp_v2.0_unigene47965 SustainPine v2.0 224
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_77.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SYL4_VITVI 2.0e-28
• FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
• Blast2go: protein high chlorophyll fluorescent 107 8.45881e-34
Internal
sp_v2.0_unigene60228 SustainPine v2.0 924
• AutoFact: pre-mRNA splicing factor, putative 1.0e-15
• FL-Next: tr=HCF107; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
• Blast2go: protein high chlorophyll fluorescent 107 2.35817e-17
C-terminus
sp_v2.0_unigene76449 SustainPine v2.0 289
• AutoFact: MSCS-like 2 protein [Arabidopsis thaliana] dbj|BAD94053.1| hypothetical protein [Arabidopsis thaliana] dbj|BAF01838.1| hypothetical protein [Arabidopsis thaliana] gb|AED91551.1| MSCS-like 2 protein [Arabidopsis thaliana] 2.0e-16
• FL-Next: tr=Putative uncharacterized protein F12B17_160; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: mscs-like 2 protein 6.74866e-17
Internal
sp_v2.0_unigene85635 SustainPine v2.0 854
• AutoFact: photosystem II stability/assembly factor HCF136 [Arabidopsis thaliana] sp|O82660.1|P2SAF_ARATH RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic; Flags: Precursor emb|CAA75723.1| HCF136 protein [Arabidopsis thaliana] dbj|BAB0982 0.0
• FL-Next: sp=Photosystem II stability/assembly factor HCF136, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: photosystem ii stability assembly factor hcf136 0.0
C-terminus
sp_v2.0_unigene85978 SustainPine v2.0 1141
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid protein 0.0
Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain