Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: nuclear chromatin

Term: GO:0000790  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3901 SustainPine v2.0 1238
AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 1.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 7.83685e-20
Putative Complete
sp_v2.0_unigene3921 SustainPine v2.0 1371
AutoFact: methyl-CPG-binding domain protein 5 [Arabidopsis thaliana] sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5; Short=AtMBD5; Short=MBD05; AltName: Full=Methyl-CpG-binding protein MBD5 emb|CAB62328.1| putative protein [Arab 3.0e-13
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 1.7833e-22
Complete
sp_v2.0_unigene4507 SustainPine v2.0 1384
AutoFact: Replication factor A 1, rfa1, putative n=1 Tax=Ricinus communis RepID=B9RK18_RICCO 0.0
FL-Next: tr=Replication factor A 1, rfa1, putative; Ricinus communis (Castor bean). 0.0
Blast2go: replication factor a1 0.0
C-terminus
sp_v2.0_unigene7076 SustainPine v2.0 564
AutoFact: Methyl binding domain protein n=1 Tax=Populus trichocarpa RepID=B9HPH2_POPTR 3.0e-11
FL-Next: sp=Methyl-CpG-binding domain-containing protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl binding domain protein 1.90878e-13
C-terminus
sp_v2.0_unigene13492 SustainPine v2.0 144
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 1.0e-08
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna mismatch repair protein mlh1 3.35693e-13
Internal
sp_v2.0_unigene20055 SustainPine v2.0 693
AutoFact: replication factor A1 [Arabidopsis thaliana] gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana] dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana] gb|AAO64881.1| At2g06510 [Arabidopsis thaliana] gb|AEC06010.1| replic 7.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit-like 2.11561e-32
N-terminus
sp_v2.0_unigene21143 SustainPine v2.0 1569
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: dna mismatch repair protein mlh1 0.0
C-terminus
sp_v2.0_unigene27864 SustainPine v2.0 2475
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a1 0.0
Complete
sp_v2.0_unigene27923 SustainPine v2.0 1949
AutoFact: RPA 70kDa subunit [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: replication factor a1 0.0
Complete
sp_v2.0_unigene33238 SustainPine v2.0 1069
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna mismatch repair protein mlh1 0.0
N-terminus
sp_v2.0_unigene62188 SustainPine v2.0 425
AutoFact: replication factor A1 [Arabidopsis thaliana] gb|AAD25150.1| putative replication protein A1 [Arabidopsis thaliana] dbj|BAC43293.1| putative replication protein A1 [Arabidopsis thaliana] gb|AAO64881.1| At2g06510 [Arabidopsis thaliana] gb|AEC06010.1| replic 8.0e-20
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: replication protein a 70 kda dna-binding subunit 2.3976e-26
N-terminus
sp_v2.0_unigene69478 SustainPine v2.0 532
AutoFact: DNA mismatch repair protein MLH1 [Arabidopsis thaliana] emb|CAA10163.1| MLH1 protein [Arabidopsis thaliana] emb|CAB78038.1| MLH1 protein [Arabidopsis thaliana] gb|AEE82726.1| DNA mismatch repair protein MLH1 [Arabidopsis thaliana] 3.0e-11
FL-Next: tr=Os01g0958900 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna mismatch repair protein mlh1 3.43537e-15
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain