Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: poly(U) RNA binding

Term: GO:0008266  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene2158 SustainPine v2.0 1673
AutoFact: mRNA-binding protein precursor [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mrna binding protein precursor-like 0.0
Complete
sp_v2.0_unigene2538 SustainPine v2.0 1967
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 33 kda chloroplastic-like 0.0
Putative Complete
sp_v2.0_unigene8650 SustainPine v2.0 1473
AutoFact: RecName: Full=50S ribosomal protein L4, chloroplastic; Short=R-protein L4; Flags: Precursor pdb|3BBO|G Chain G, Homology Model For The Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome emb|CAA75149.1| chloroplast ribosom 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l4 0.0
Complete
sp_v2.0_unigene13219 SustainPine v2.0 575
AutoFact: Similar to tRNA-splicing endonuclease positive effector SEN1 [Arabidopsis thaliana] 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing endonuclease positive effector 0.0
Internal
sp_v2.0_unigene15525 SustainPine v2.0 1641
AutoFact: hydroxypyruvate reductase [Bruguiera gymnorhiza] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydroxypyruvate reductase 0.0
Complete
sp_v2.0_unigene15526 SustainPine v2.0 1562
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Complete
sp_v2.0_unigene15538 SustainPine v2.0 1962
AutoFact: Serine hydroxymethyltransferase n=2 Tax=Picea sitchensis RepID=A9NUX0_PICSI 0.0
FL-Next: sp=Serine hydroxymethyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine hydroxymethyltransferase 0.0
Complete
sp_v2.0_unigene15934 SustainPine v2.0 1568
AutoFact: [R] COG2605 Predicted kinase related to galactokinase and mevalonate kinase 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ghmp kinase family protein 0.0
Complete
sp_v2.0_unigene17301 SustainPine v2.0 1496
AutoFact: ferredoxin-NADP+ reductase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-nadp+ reductase 0.0
Complete
sp_v2.0_unigene18249 SustainPine v2.0 1444
AutoFact: putative NADH-dependent hydroxypyruvate reductase [Glycine max] gb|ACU20219.1| unknown [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydroxypyruvate reductase 0.0
Complete
sp_v2.0_unigene19405 SustainPine v2.0 2783
AutoFact: protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] ref|NP_849390.1| protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] sp|Q8RW96.2|2A5G_ARATH RecName: Full=Serine/threonine protein phosphatase 0.0
FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Complete
sp_v2.0_unigene45968 SustainPine v2.0 607
AutoFact: Similar to tRNA-splicing endonuclease positive effector SEN1 [Arabidopsis thaliana] 1.0e-22
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sen1 protein 6.3969e-23
Internal
sp_v2.0_unigene47968 SustainPine v2.0 370
AutoFact: Similar to tRNA-splicing endonuclease positive effector SEN1 [Arabidopsis thaliana] 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: hydrolase domain-containing protein 1.50313e-12
Internal
sp_v2.0_unigene65348 SustainPine v2.0 635
AutoFact: RecName: Full=Ferredoxin--NADP reductase, chloroplastic; Short=FNR; Flags: Precursor gb|AAA33029.1| ferredoxin-NADP+ reductase precursor [Mesembryanthemum crystallinum] prf||1604475A ferredoxin NADP reductase 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-nadp+ reductase 9.03652e-37
C-terminus
sp_v2.0_unigene67400 SustainPine v2.0 272
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast rna-binding protein 29 5.26465e-28
Putative C-terminus
sp_v2.0_unigene72025 SustainPine v2.0 391
AutoFact: Similar to tRNA-splicing endonuclease positive effector SEN1 [Arabidopsis thaliana] 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hydrolase domain-containing protein 4.66098e-14
N-terminus
sp_v2.0_unigene78533 SustainPine v2.0 789
AutoFact: NADH-dependent hydroxypyruvate reductase [Pachysandra terminalis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydroxypyruvate reductase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain