Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: gene silencing

Term: GO:0016458  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene3936 SustainPine v2.0 1083
AutoFact: DNA methyltransferase [Nicotiana tabacum] 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna (cytosine-5)-methyltransferase drm2 0.0
Internal
sp_v2.0_unigene13179 SustainPine v2.0 763
AutoFact: Domains rearranged methyltransferase n=3 Tax=Nicotiana RepID=B1GYI2_NICSY 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: domains rearranged methyltransferase 0.0
Putative C-terminus
sp_v2.0_unigene30838 SustainPine v2.0 378
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 9.99995e-41
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna methyltransferase 0.0
Internal
sp_v2.0_unigene42407 SustainPine v2.0 402
AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q1L6W2_GINBI 0.0
FL-Next: Isoform 2 of DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana GN=NRPD2b 0.0
Blast2go: dna-directed rna polymerase d subunit 2a-like 0.0
Internal
sp_v2.0_unigene59664 SustainPine v2.0 630
AutoFact: pfam00076, RRM_1, RNA recognition motif 3.0e-05
FL-Next: tr=Os02g0138200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: rna recognition motif-containing protein 8.75526e-34
N-terminus
sp_v2.0_unigene68014 SustainPine v2.0 409
AutoFact: DRM-type DNA-methyltransferase n=1 Tax=Elaeis guineensis RepID=B4XTT0_ELAGV 6.02558e-44
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: domains rearranged methyltransferase 0.0
C-terminus
sp_v2.0_unigene83883 SustainPine v2.0 553
AutoFact: S-adenosylmethionine decarboxylase proenzyme n=2 Tax=Picea sitchensis RepID=B8LQ15_PICSI 0.0
FL-Next: sp=S-adenosylmethionine decarboxylase proenzyme; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: s-adenosylmethionine decarboxylase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain