Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA integration

Term: GO:0015074  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene4991 SustainPine v2.0 636
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 0.0
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 0.0
Internal
sp_v2.0_unigene12616 SustainPine v2.0 643
AutoFact: serine/threonine-protein kinase Nek5 [Arabidopsis thaliana] sp|Q0WPH8.1|NEK5_ARATH RecName: Full=Serine/threonine-protein kinase Nek5; AltName: Full=NimA-related protein kinase 5; Short=AtNEK6; Short=AtNek5 dbj|BAF00971.1| protein kinase like protein [Ara 4.0e-28
FL-Next: sp=Serine/threonine-protein kinase Nek5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine threonine-protein kinase nek5-like 1.28603e-34
N-terminus
sp_v2.0_unigene13281 SustainPine v2.0 131
AutoFact: Reverse transcriptase (Fragment) n=1 Tax=Picea abies RepID=Q9FY10_PICAB 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reverse transcriptase 1.73073e-14
Internal
sp_v2.0_unigene14519 SustainPine v2.0 2068
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 0.0
C-terminus
sp_v2.0_unigene19072 SustainPine v2.0 1926
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 0.0
C-terminus
sp_v2.0_unigene20564 SustainPine v2.0 671
AutoFact: CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana] gb|AEE28167.1| CCR4-NOT transcription complex subunit 2 [Arabidopsis thaliana] 1.0e-31
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 2.43342e-39
Internal
sp_v2.0_unigene37095 SustainPine v2.0 578
AutoFact: DNA ligase n=2 Tax=Oryza sativa RepID=B9FCD0_ORYSJ 2.0e-19
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna ligase 4-like 4.4103e-19
Internal
sp_v2.0_unigene43074 SustainPine v2.0 341
AutoFact: DNA ligase n=1 Tax=Populus trichocarpa RepID=B9IN68_POPTR 7.0e-26
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 5.58879e-30
Internal
sp_v2.0_unigene80711 SustainPine v2.0 372
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 2.0e-11
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 3.43899e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain