|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
sp_v2.0_unigene282
|
SustainPine v2.0
|
2299
|
|
• AutoFact: pfam00665, rve, Integrase core domain
|
5.0e-12
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: gag-pol polyprotein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene961
|
SustainPine v2.0
|
2399
|
|
• AutoFact: DNA repair protein recA-like 3 [Arabidopsis thaliana] sp|Q9ZUP2.2|RECA3_ARATH RecName: Full=DNA repair protein recA homolog 3, mitochondrial; AltName: Full=Recombinase A homolog 3; Flags: Precursor gb|ABM06015.1| At2g19490 [Arabidopsis thaliana] gb|AEC068
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna repair protein reca homolog mitochondrial-like
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene962
|
SustainPine v2.0
|
1729
|
|
• AutoFact: DNA repair protein RAD51 homolog n=1 Tax=Solanum lycopersicum RepID=RAD51_SOLLC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna repair protein rad51 homolog
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene2018
|
SustainPine v2.0
|
1977
|
|
• AutoFact: DNA ligase n=5 Tax=Poaceae RepID=Q7XD67_ORYSJ
|
0.0
|
|
• FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: dna ligase
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene3088
|
SustainPine v2.0
|
1243
|
|
• AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB82685.1| putative protein [Arabidopsis thaliana] dbj|BAE98596.1| hypothetical protein [Arabidopsis thaliana] gb|ABK32189.1| At3g60810 [Arabidopsis thaliana] gb|AEE80110.1| uncharacterized protein [Arab
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uncharacterized protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene3982
|
SustainPine v2.0
|
521
|
|
• AutoFact: DNA repair protein recA homolog 1, chloroplastic n=3 Tax=Arabidopsis thaliana RepID=RECAC_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna repair protein reca-like 1
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene4211
|
SustainPine v2.0
|
1008
|
|
• AutoFact: DNA mismatch repair protein PMS2 [Arabidopsis thaliana] gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana] gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna mismatch repair protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene4677
|
SustainPine v2.0
|
810
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=9 Tax=Oryza sativa RepID=Q109L4_ORYSJ
|
5.0e-15
|
|
• FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco).
|
0.0
|
|
• Blast2go: copia partial
|
1.08822e-18
|
|
C-terminus
|
|
sp_v2.0_unigene4991
|
SustainPine v2.0
|
636
|
|
• AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI
|
0.0
|
|
• FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: dna ligase
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene5637
|
SustainPine v2.0
|
1472
|
|
• AutoFact: DNA helicase recq1, putative n=1 Tax=Ricinus communis RepID=B9S1J8_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: atp-dependent dna helicase q-like 2
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene6509
|
SustainPine v2.0
|
1169
|
|
• AutoFact: [L] COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)
|
5.0e-13
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene7042
|
SustainPine v2.0
|
240
|
|
• AutoFact: Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Oryza sativa Japonica Group RepID=Q2QYR7_ORYSJ
|
9.0e-10
|
|
• FL-Next: tr=Retrotransposon protein, putative, Ty1-copia subclass; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: retrotransposon ty1-copia subclass
|
1.74658e-09
|
|
Internal
|
|
sp_v2.0_unigene7069
|
SustainPine v2.0
|
689
|
|
• AutoFact: ATP-dependent DNA helicase Q-like 3 n=2 Tax=Arabidopsis thaliana RepID=RQL3_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: atp-dependent dna helicase q-like 3
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene7344
|
SustainPine v2.0
|
464
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7TKE6_VITVI
|
3.0e-25
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein breast cancer susceptibility 1 homolog
|
1.18593e-28
|
|
Putative N-terminus
|
|
sp_v2.0_unigene8046
|
SustainPine v2.0
|
599
|
|
• AutoFact: ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana] sp|Q9FT73.1|RQL2_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 2; AltName: Full=RecQ-like protein 2; Short=AtRecQ2; Short=AtRecQl2 emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana] gb|AE
|
3.99931e-42
|
|
• FL-Next: sp=ATP-dependent DNA helicase Q-like 2; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: atp-dependent dna helicase q-like 2-like
|
0.0
|
|
Putative N-terminus
|
|
sp_v2.0_unigene9208
|
SustainPine v2.0
|
769
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene9955
|
SustainPine v2.0
|
2091
|
|
• AutoFact: BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana] gb|AEE74463.1| BRCA1/BRCA2-containing complex subunit 3 [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: brca1 brca2-containing complex subunit 3
|
0.0
|
|
Complete
|
|
sp_v2.0_unigene12254
|
SustainPine v2.0
|
659
|
|
• AutoFact: Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana RepID=Q9LH44_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
C-terminus
|
|
sp_v2.0_unigene13002
|
SustainPine v2.0
|
579
|
|
• AutoFact: UvrD/REP helicase family protein [Trichomonas vaginalis G3] gb|EAY01482.1| UvrD/REP helicase family protein [Trichomonas vaginalis G3]
|
9.0e-11
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: atp-dependent dna helicase
|
0.0
|
|
Internal
|
|
sp_v2.0_unigene13290
|
SustainPine v2.0
|
1018
|
|
• AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: retrotransposon unclassified
|
0.0
|
|
C-terminus
|
