Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA mediated transformation

Term: GO:0009294  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene66192 SustainPine v2.0 411
AutoFact: Transcription initiation factor tfiid, putative n=1 Tax=Ricinus communis RepID=B9S9F7_RICCO 2.0e-15
FL-Next: sp=Transcription initiation factor TFIID subunit 1-A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription initiation factor tfiid subunit 1-a 4.34603e-19
N-terminus
sp_v2.0_unigene66306 SustainPine v2.0 128
AutoFact: DNA (cytosine-5)-methyltransferase 1 n=3 Tax=Arabidopsis RepID=DNMT1_ARATH 7.0e-08
FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna (cytosine-5-)-methyltransferase 2.59265e-10
Internal
sp_v2.0_unigene69892 SustainPine v2.0 174
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 6.0e-22
FL-Next: Isoform 2 of Histone acetyltransferase HAC1 OS=Arabidopsis thaliana GN=HAC1 0.0
Blast2go: histone acetyltransferase 2.16635e-26
Internal
sp_v2.0_unigene70285 SustainPine v2.0 427
AutoFact: Histone H2A (Fragment) n=1 Tax=Hyacinthus orientalis RepID=Q5YJR4_HYAOR 2.0e-19
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 8.86314e-26
Putative Complete
sp_v2.0_unigene75613 SustainPine v2.0 262
AutoFact: Global transcription factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I3M5_POPTR 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: global transcription factor group e4 4.45931e-17
Internal
sp_v2.0_unigene79295 SustainPine v2.0 413
AutoFact: Histone H2A n=4 Tax=Chlorella variabilis RepID=E1ZCE3_9CHLO 2.0e-26
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2a 9.47383e-34
N-terminus
sp_v2.0_unigene79919 SustainPine v2.0 462
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 7.0e-36
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 1.05097e-42
Internal
sp_v2.0_unigene81496 SustainPine v2.0 767
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 7.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 7.38022e-31
Putative Complete
sp_v2.0_unigene82085 SustainPine v2.0 695
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 3.06952e-29
Putative Complete
sp_v2.0_unigene85511 SustainPine v2.0 596
AutoFact: Histone deacetylase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U4N6_VITVI 0.0
FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Internal
sp_v2.0_unigene86532 SustainPine v2.0 504
AutoFact: Histone deacetylase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U4N6_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain