Sustainpine_db
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Assembly Name: SustainPine v2.0

Name: DNA mediated transformation

Term: GO:0009294  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
sp_v2.0_unigene16049 SustainPine v2.0 1085
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 7.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 1.96182e-44
Complete
sp_v2.0_unigene16056 SustainPine v2.0 795
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 4.06377e-44
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
Complete
sp_v2.0_unigene17150 SustainPine v2.0 1115
AutoFact: Nucleosome assembly protein family n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TVZ4_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome assembly protein 1 2 0.0
Putative Complete
sp_v2.0_unigene18149 SustainPine v2.0 875
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 0.0
FL-Next: sp=Probable histone acetyltransferase HAC-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: histone acetyltransferase 0.0
Internal
sp_v2.0_unigene21053 SustainPine v2.0 2102
AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v2.0_unigene21075 SustainPine v2.0 2569
AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 0.0
Complete
sp_v2.0_unigene23750 SustainPine v2.0 892
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 1.19481e-29
Putative Complete
sp_v2.0_unigene24072 SustainPine v2.0 1048
AutoFact: Transcription cofactor, putative n=1 Tax=Ricinus communis RepID=B9RHR9_RICCO 3.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 3.81477e-29
Putative Complete
sp_v2.0_unigene25385 SustainPine v2.0 846
AutoFact: Histone H2A.6 n=6 Tax=Spermatophyta RepID=H2A6_ARATH 6.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 5.01752e-37
Complete
sp_v2.0_unigene25911 SustainPine v2.0 877
AutoFact: chromatin complex subunit A101 [Zea mays] gb|AAL73042.1|AF461813_1 chromatin complex subunit A101 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
C-terminus
sp_v2.0_unigene28282 SustainPine v2.0 1818
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative Complete
sp_v2.0_unigene28564 SustainPine v2.0 861
AutoFact: Histone deacetylase RPD3/HDA1 class II n=3 Tax=Triticeae RepID=C1IC96_HORVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 15-like 0.0
C-terminus
sp_v2.0_unigene29967 SustainPine v2.0 394
AutoFact: DNA (cytosine-5)-methyltransferase 1 n=3 Tax=Arabidopsis RepID=DNMT1_ARATH 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: DNA (cytosine-5)-methyltransferase 0.0
Internal
sp_v2.0_unigene30185 SustainPine v2.0 1067
AutoFact: Cytosine-specific methyltransferase n=1 Tax=Ricinus communis RepID=B9RWB0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna methyltransferase 0.0
Putative Complete
sp_v2.0_unigene31403 SustainPine v2.0 325
AutoFact: Histone methylase n=2 Tax=Andropogoneae RepID=B3VSN3_MAIZE 4.0e-23
FL-Next: sp=Histone-lysine N-methyltransferase ATX5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 1.37132e-23
C-terminus
sp_v2.0_unigene34269 SustainPine v2.0 392
AutoFact: histone deacetylase 6 [Arabidopsis thaliana] sp|Q9FML2.1|HDA6_ARATH RecName: Full=Histone deacetylase 6 dbj|BAB10553.1| histone deacetylase [Arabidopsis thaliana] gb|AAL60022.1| putative histone deacetylase [Arabidopsis thaliana] gb|AAM65853.1| histone de 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase 2.50526e-22
Putative Complete
sp_v2.0_unigene35504 SustainPine v2.0 695
AutoFact: Cytosine-specific methyltransferase n=6 Tax=Nicotiana RepID=A0A9R7_TOBAC 1.00053e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: DNA (cytosine-5)-methyltransferase 3.37713e-43
Putative Complete
sp_v2.0_unigene36722 SustainPine v2.0 641
AutoFact: Histone acetyltransferase HAC1 n=4 Tax=Arabidopsis RepID=HAC1_ARATH 4.0e-30
FL-Next: sp=Histone acetyltransferase HAC1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone acetyltransferase 6.08289e-33
C-terminus
sp_v2.0_unigene37675 SustainPine v2.0 741
AutoFact: DNA/RNA helicase protein RAD5 [Arabidopsis thaliana] sp|Q9FNI6.1|SM3L2_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Short=SMARCA3-like protein 2 dbj|BAB11681.1| DNA repa 0.0
FL-Next: sp=Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
sp_v2.0_unigene37856 SustainPine v2.0 419
AutoFact: putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 [Arabidopsis thaliana] ref|NP_001031625.1| putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9 [Arabidopsis thaliana] sp|Q9T0G7.1|SUVH9_ARATH RecName: Full=Probabl 2.0e-28
FL-Next: sp=Probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh9 4.2498e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain